PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cla022580

Organism

Citrullus lanatus

Taxonomic ID

3654

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus

Family

bZIP

Protein Properties

Length: 448aa MW: 48902.1 Da PI: 10.3124

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cla022580	genome	ICuGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.9	2.9e-15	333	385	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+++ e+ ++ + Cla022580 333 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQK 385 79****************************************99999988865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	9.0E-15	325	380	No hit	No description
SMART	SM00338	1.6E-12	329	393	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.461	331	382	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.8E-13	333	385	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.38E-10	333	381	No hit	No description
CDD	cd14707	2.60E-25	333	385	No hit	No description
PROSITE pattern	PS00036	0	336	351	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence Send to blast
MNFKDFGNDP SAGNGGGGGR PPANYPLARQ SSIYSLTFDE FQSMGSIGKD FGSMNMDELL 60 KNIWSAEEMQ TMASSAAAVD KEGAGSVGRS GGYLQRQGSL TLPRTLSQKK VDEVWKDIIN 120 EHASAKDGAT VASNLQQRQQ TLGEMTLEEF LFRAGVVRED TQVTANPNNG GFFGNNTGFG 180 IGFQRQAKVP ENNNHIPIQS SNLSLNVNGV RTHQPQPIFP KQPAVTYGSQ LALPSDGQLA 240 SPGIRGGIMG IGDQGLNTNL MQGSALQGGR MGVVNIAAAP LPIATESPRD QLSSDGIGKS 300 NGDTSSVSPV PYALNGGIRG RRSNGIVDKV VERRQRRMIK NRESAARSRA RKQAYTMELE 360 AEVAKLKEEN QELRQKQAEI MEMQKNRALE VMDKQQGIKK RCLRRTQTGP WCRVAYVSRR 420 LACRVSYNVF ASKWIIKSSV AFEWKQNT

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence Send to blast

MNFKDFGNDP SAGNGGGGGR PPANYPLARQ SSIYSLTFDE FQSMGSIGKD FGSMNMDELL  60
KNIWSAEEMQ TMASSAAAVD KEGAGSVGRS GGYLQRQGSL TLPRTLSQKK VDEVWKDIIN  120
EHASAKDGAT VASNLQQRQQ TLGEMTLEEF LFRAGVVRED TQVTANPNNG GFFGNNTGFG  180
IGFQRQAKVP ENNNHIPIQS SNLSLNVNGV RTHQPQPIFP KQPAVTYGSQ LALPSDGQLA  240
SPGIRGGIMG IGDQGLNTNL MQGSALQGGR MGVVNIAAAP LPIATESPRD QLSSDGIGKS  300
NGDTSSVSPV PYALNGGIRG RRSNGIVDKV VERRQRRMIK NRESAARSRA RKQAYTMELE  360
AEVAKLKEEN QELRQKQAEI MEMQKNRALE VMDKQQGIKK RCLRRTQTGP WCRVAYVSRR  420
LACRVSYNVF ASKWIIKSSV AFEWKQNT

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681823	0.0	LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBank	LN713257	0.0	LN713257.1 Cucumis melo genomic chromosome, chr_3.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022996660.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
Swissprot	Q9M7Q4	1e-133	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1S3BBK0	0.0	A0A1S3BBK0_CUCME; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRING	XP_008444613.1	0.0	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-108	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]