PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla022644
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 149aa    MW: 17320.7 Da    PI: 6.9367
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla022644genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.6e-1366115554
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                ++ rr+++NRe+ArrsR RKk  +e L+++v  L  +N++Lk++l +  +
  Cla022644  66 RKLRRMISNRESARRSRWRKKRHLEDLTNEVNRLMIQNRELKERLGRVLN 115
                6789****************************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.7E-1158112No hitNo description
SMARTSM003387.0E-1262126IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.47364113IPR004827Basic-leucine zipper domain
PfamPF001707.3E-1166117IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.32E-1166118No hitNo description
CDDcd147029.32E-1667118No hitNo description
PROSITE patternPS0003606984IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MAMLNMAEDG VGFQCEVLEN DHEFTATEIE ELLSLFLAND GPPSPGSDSQ GSMRTSATCS  60
TNDDERKLRR MISNRESARR SRWRKKRHLE DLTNEVNRLM IQNRELKERL GRVLNHRHVV  120
LRENDWLWME SVGLRARLSD LCRILAVIQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818231e-154LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBankLN7132571e-154LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008444526.15e-95PREDICTED: basic leucine zipper 8
TrEMBLA0A1S3BAH51e-93A0A1S3BAH5_CUCME; basic leucine zipper 8
STRINGXP_008444526.12e-94(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-18basic leucine-zipper 5