PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cla023435

Organism

Citrullus lanatus

Taxonomic ID

3654

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus

Family

NZZ/SPL

Protein Properties

Length: 334aa MW: 36169.6 Da PI: 6.0088

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cla023435	genome	ICuGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	40.7	5.7e-13	15	177	37	182
NOZZLE 37 tetkksr.grkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgd...tssvaaisntatrlpv...pvdrgvvlqgfps........slgs 121 +e+ k+r grk g+k +qkkp rg+gva+ler +++e+ k ++ s nt +p+ + + +v g sl Cla023435 15 AEPAKTRpGRKTGTKN--PNQKKPPQRGLGVAQLERLRLQEKWKIMTEMPPPHhffQSHPPLLDNTFLNFPLhfpAAAPPMVATGCGGgvlgfdhqSLVV 112 3455555466666554..579******************999998655433311145555667888888762212355667777666666666677877 PP NOZZLE 122 sri..lcggvgsgqvmid..pvispwgfvetsatthelssisn...pqmynassnnrcdtcfkkkrld 182 +ri g g g++ v+ ve s elssi++ p + + +rcdtcfkkkr++ Cla023435 113 QRIgnNAGFLGGGELYPHggGVLIGNSSVEVSR---ELSSIPKlppPPPFPSCDSDRCDTCFKKKRVN 177 887434677788887754114666667778777...888886544489999999***********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	1.5E-5	15	56	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence Send to blast
MATPIHTGRE ETRPAEPAKT RPGRKTGTKN PNQKKPPQRG LGVAQLERLR LQEKWKIMTE 60 MPPPHHFFQS HPPLLDNTFL NFPLHFPAAA PPMVATGCGG GVLGFDHQSL VVQRIGNNAG 120 FLGGGELYPH GGGVLIGNSS VEVSRELSSI PKLPPPPPFP SCDSDRCDTC FKKKRVNFSN 180 IMKEKNINIA AAETPPLAAA SSFDFLGLSK NSTAELNSPT IVNHHTNSDF DFSFNFNQGR 240 GGDSGGGGGG GGEESRLMEY EFFPRKNGRG TEIEELKMPK EELSLFGEEN EEEEEEVLAV 300 DHGEGSCITT SCNDIINGGT RNSTALDLSL KLSF

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681826	1e-119	LN681826.1 Cucumis melo genomic scaffold, anchoredscaffold00032.
GenBank	LN713258	1e-119	LN713258.1 Cucumis melo genomic chromosome, chr_4.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008454619.1	1e-133	PREDICTED: uncharacterized protein LOC103494987 isoform X1
TrEMBL	A0A1S3BZ57	1e-131	A0A1S3BZ57_CUCME; uncharacterized protein LOC103494987 isoform X1
STRING	XP_008454619.1	1e-132	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8365	17	23