PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cotton_A_00304_BGI-A2_v1.0

Common Name

F383_01995

Organism

Gossypium arboreum

Taxonomic ID

29729

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

bZIP

Protein Properties

Length: 170aa MW: 19097.8 Da PI: 10.2765

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cotton_A_00304_BGI-A2_v1.0	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30	1.1e-09	84	119	5	40
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k+ +r++ NR +A++sR+R+ +++++Le+k++ Lea Cotton_A_00304_BGI-A2_v1.0 84 KKLKRLIANRASAQKSRLRRVEYVDKLEKKAEFLEA 119 899*****************************9998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.3E-9	80	144	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.864	82	145	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.3E-9	84	149	No hit	No description
Pfam	PF00170	4.4E-8	84	120	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.44E-8	84	133	No hit	No description
CDD	cd14703	5.99E-11	85	136	No hit	No description
PROSITE pattern	PS00036	0	87	102	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence Send to blast
MDPKNETSPN AADNQMLNPN AENEDLTLPL ESIQPRRVSL HKRSASDSLA FVKEPYWHAP 60 SSSAQGRLLG GAAGSSSASH MDPKKLKRLI ANRASAQKSR LRRVEYVDKL EKKAEFLEAT 120 ASLVSPRVTS ERKKRMMLLK ENAELKQKIE FYDKLLEKQD GEAAMLNIKH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017622672.1	1e-121	PREDICTED: basic leucine zipper 2-like isoform X2
TrEMBL	A0A0B0MP23	1e-120	A0A0B0MP23_GOSAR; Transcription factor RF2b
STRING	Gorai.002G265300.1	1e-100	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM18651	6	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	4e-16	bZIP family protein