PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_11309_BGI-A2_v1.0
Organism
Gossypium arboreum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family VOZ
Protein Properties Length: 662aa    MW: 74033.3 Da    PI: 7.5486
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_11309_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ433.82.3e-1334176322217
                         VOZ   2 ppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaa 84 
                                 ppsaflgpkcalwdc+rpaq  +w qdycssfha+la+neg+pg+ p+lrp+gi+lkdgllfaalsak+qgk+vgipecegaa
  Cotton_A_11309_BGI-A2_v1.0 417 PPSAFLGPKCALWDCPRPAQVLDWSQDYCSSFHAALAMNEGPPGMGPILRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAA 499
                                 7********************************************************************************** PP

                         VOZ  85 takspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167
                                 takspwna+elfdls+l+ge+irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++few
  Cotton_A_11309_BGI-A2_v1.0 500 TAKSPWNAPELFDLSVLDGESIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEW 582
                                 *********************************************************************************** PP

                         VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                 hlyeyein++da+alyrlelklvd+kksakgk ++d++adlqk++grlta
  Cotton_A_11309_BGI-A2_v1.0 583 HLYEYEINKCDACALYRLELKLVDGKKSAKGKSANDTVADLQKQMGRLTA 632
                                 ************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF070473.5E-403126IPR010754Optic atrophy 3-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 662 aa     Download sequence    Send to blast
MVLPLLKLGT LALKTLSKPV AARLKKQAAY APRFREFIVA IAQANHRITT RMQRRIYSHA  60
TDAAIRPLDE EKAVQAAVDL IGELFVFTVA GAVLIFEVQR SSRSEAKKEE ARRKDLEAMK  120
QRNEELATQV ELLRHKLEEL EQLAKRQGLS GIFKLKPANM EGKIGQSSLM NKSSEIWSKF  180
SSGLILSLWL IAFWIPGFWL ELLSVVILMG KGSRSNCKSA SHKLFKDRAK NRVDDLQGMF  240
LDLQFARKES RSVDVAVLEE QVHQMLREWK AELNEPSPAS SLQQGGSLGS FSSDICRLLQ  300
LCEEEDDATS VLAAPKPEPN DQNLQVGDTA AFQEEGYGVN QGQHERGFPL VDHCKDSPSG  360
VRTMPINNLD EATQLEYHQF DLHQDFEHFY TGFNGTGFSG EDAMLHTSSY LPSICLPPSA  420
FLGPKCALWD CPRPAQVLDW SQDYCSSFHA ALAMNEGPPG MGPILRPGGI GLKDGLLFAA  480
LSAKAQGKDV GIPECEGAAT AKSPWNAPEL FDLSVLDGES IREWLFFDKP RRAFESGNRK  540
QRSLPDYSGR GWHESRKQVM NEFGGLKRSY YMDPQPLNHF EWHLYEYEIN KCDACALYRL  600
ELKLVDGKKS AKGKSANDTV ADLQKQMGRL TAEFPTDNKR YVKGRAKINA KVTVGNPYST  660
QN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017607448.10.0PREDICTED: transcription factor VOZ1-like
RefseqXP_017607449.10.0PREDICTED: transcription factor VOZ1-like
RefseqXP_017607451.10.0PREDICTED: transcription factor VOZ1-like
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A0B0P2L70.0A0A0B0P2L7_GOSAR; Dihydrolipoyl dehydrogenase
STRINGGorai.009G165800.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66672745
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]