PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cotton_A_25018_BGI-A2_v1.0

Organism

Gossypium arboreum

Taxonomic ID

29729

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

VOZ

Protein Properties

Length: 462aa MW: 51814.6 Da PI: 6.9925

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cotton_A_25018_BGI-A2_v1.0	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	403.6	4.1e-124	190	405	1	216
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecega 83 p+psaflgpkcalwdc+rp+q + dycssfha+la+neg+pg+ pvlrp+gi+lkdgllfaalsak+qgk+ gipec+ga Cotton_A_25018_BGI-A2_v1.0 190 PSPSAFLGPKCALWDCPRPTQRLGGCLDYCSSFHAALAMNEGPPGMGPVLRPGGIGLKDGLLFAALSAKTQGKDAGIPECQGA 272 89******************************************************************************* PP VOZ 84 atakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfe 166 ataks wna+elfdl +l+ge irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fe Cotton_A_25018_BGI-A2_v1.0 273 ATAKSLWNAPELFDLLVLDGELIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFE 355 ******************************************************************************* PP VOZ 167 whlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlt 216 whlyeyein++da+alyrlelklvd+kksakgk +d+++ k++grlt Cotton_A_25018_BGI-A2_v1.0 356 WHLYEYEINKCDACALYRLELKLVDGKKSAKGKPVNDTVSYQHKHMGRLT 405 **********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence Send to blast
MGKGSKNNCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRGIDVAVL EEQLHQMLRE 60 WKAELNEPSP ASSLQQVRTA FIGGSLGSFS SDICRLLQLC EEEDDATSIL VVPKPEPNDQ 120 SPQVGDIAAS QERYAVNQGQ HECGFPLVDQ CKESPSQDFE HFYTGYNDTE FYREDDAMPR 180 TYSYLPSKCP SPSAFLGPKC ALWDCPRPTQ RLGGCLDYCS SFHAALAMNE GPPGMGPVLR 240 PGGIGLKDGL LFAALSAKTQ GKDAGIPECQ GAATAKSLWN APELFDLLVL DGELIREWLF 300 FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVMNEFGGL KRSYYMDPQP LNHFEWHLYE 360 YEINKCDACA LYRLELKLVD GKKSAKGKPV NDTVSYQHKH MGRLTDGFSS EKKCCFKGRT 420 KVNAKIGVGN FFPTVNAVVP MSEKFEYGLS VQYNYVGSYY LT

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence Send to blast

MGKGSKNNCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRGIDVAVL EEQLHQMLRE  60
WKAELNEPSP ASSLQQVRTA FIGGSLGSFS SDICRLLQLC EEEDDATSIL VVPKPEPNDQ  120
SPQVGDIAAS QERYAVNQGQ HECGFPLVDQ CKESPSQDFE HFYTGYNDTE FYREDDAMPR  180
TYSYLPSKCP SPSAFLGPKC ALWDCPRPTQ RLGGCLDYCS SFHAALAMNE GPPGMGPVLR  240
PGGIGLKDGL LFAALSAKTQ GKDAGIPECQ GAATAKSLWN APELFDLLVL DGELIREWLF  300
FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVMNEFGGL KRSYYMDPQP LNHFEWHLYE  360
YEINKCDACA LYRLELKLVD GKKSAKGKPV NDTVSYQHKH MGRLTDGFSS EKKCCFKGRT  420
KVNAKIGVGN FFPTVNAVVP MSEKFEYGLS VQYNYVGSYY LT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017608035.1	0.0	PREDICTED: LOW QUALITY PROTEIN: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2P5W051	0.0	A0A2P5W051_GOSBA; Uncharacterized protein
STRING	Gorai.010G157200.1	0.0	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6667	27	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]