PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre01.g051174.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

bZIP

Protein Properties

Length: 2019aa MW: 198081 Da PI: 6.4419

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre01.g051174.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.7	1.2e-08	987	1036	4	53
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +k r+++NR+AA+++R++K + i++ + + + + N++L+ +l +l+ Cre01.g051174.t1.1 987 DKTVLRRERNRLAAKKCRAKKMEFIAQMQAQLDDMAQRNEELATQLATLQ 1036 78889**************************************9998886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-4	984	1045	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.128	986	1037	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.31E-9	986	1037	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.6E-11	988	1037	No hit	No description
Pfam	PF07716	2.7E-6	990	1037	IPR004827	Basic-leucine zipper domain
CDD	cd14809	1.03E-12	991	1040	No hit	No description
PROSITE pattern	PS00036	0	992	1006	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 2019 aa Download sequence Send to blast
MDLANAPSLG FFLAAAASGG SGGGLNGIGS GDGGGGGGGS SNGGGFADRL DTSRLASLDT 60 LAAAALAVEV EDEFGLGLAL GLGPPAGEAG GTGGGGLARP RSGLLLRARS VPLPHQQHQH 120 LQYVHAPSQC HAAAADCGGE ASAQAQPQPQ LDQQQRVRQL SRAAATPFAL GAPPPASPPA 180 ALDSAGGGGS GGAGAGAGLG GGDIGVPAAH TLSPPASPLH PAPAGPVVAP MRLQPATPPA 240 AGRGTAPAAT PFATAAAAAT GSASMPAAGT PGDLGDSQEQ GQQVEKAALP GSGNDATTSA 300 VSGGTCDGGT CDGGMPAPQT PSAAAKRDSK GGGGDGSLSG GGGSNGSRQL PHASQPRISA 360 PSAAGGGKNT TAAPASAPAS ADASASLLAG ANTASTPAQL PPLPPLPQPS RSSAKAPVVR 420 PGRPAGSPPP NTARGPLRQQ HLPDLSSLRP GGPSTSSRAS GSAGAAGTST ATKAKKGGQA 480 PARSKTPPRG RSDGAAAGAQ SEGTGGGGEA DSRQQKGAAD GGPRCRLPKR AAAVAAARRL 540 ADRSSGGGSQ AAEQEVVGGE VEEVGGEGVE EGQEEAEPVG SEEEDEEVNS SESHDGPGAE 600 AEPGAANGTL TAITAHMSPS PFRPAAPTTA RAPLAAPAAP AAPATTTAAD VVAGDAAALI 660 CWASPEPPPP LHQQQQPLLL PGPASSHAGD TAGAPGTVPS QLTRCTPGLS HAHISSASPE 720 AAPLPLQPHL PYPQPQPPAL GPPLQLQPPP SPHAPPHQLQ SPPKPEQLLS QPPRPPQPVG 780 GADLSPYLDV PSDIRCPEEL DLLPPLPPLP RLKLQPPGSK LQPSGSQPEQ QQRPGDALPL 840 GSATSSGAVK SSGVAKPPSP TLAGTKRQAP APAVPLASGA PAGGSRTAAA AAAGGDEQEP 900 QPPPAKKSKK KKKKGGGAGA ASGGGAAGAE GGAGGSPPRS LPPVSSLLGL PTPASAAAAA 960 AVAAAAAAAE VAAAACAGTP RPIKTNDKTV LRRERNRLAA KKCRAKKMEF IAQMQAQLDD 1020 MAQRNEELAT QLATLQRLHV RELHCKEVLK MVLQGCWDLP GGAASRLPYS ADAVLASLEA 1080 GTMDVGPLLD ALSGAAEPPP LRQPEQLQGQ GQHQQHQQTP RHLQQPQQAQ QPQKAQQLQY 1140 PQQQQQALMA PPGAPPASPH APSLDPGASP QQQGLLLPAP LHLPHGAPVL LPPSAASAGG 1200 AASAEVAAAA KAAVAAGVHL PQAGSVTDAT ASAGGAAATT PAFLPVAGGS GAFDTLQRQQ 1260 QPPQRQQQPQ AAAVEEEDED EDAADDRAAA EAEERRLPEP QPPAHMVGSG GGGGGGGNTF 1320 TALLRGGSLG FAASLQAASR AGFGGSATGY GAAGNGASGS AAAGSGGGGG SLTASGRLGS 1380 LDWLLLAAAS MDAGTANAIG AAVGGDPAGS TGGGAGENAG NDNSAGGQLP PPRPLDIPQL 1440 HGGSGGDGGV GSAAVAAAPD DGNATGYYVG DGGGGGGGPL SAFANLPYQP PHQQQQQQPQ 1500 AAPHAAALPQ QSAYWGQQPY GPLMPYPTEA APGSSAAGAP AALGTGLLPQ GHQEHGQGQG 1560 HQSPLQLQVP RHPPGHPGLH CLTQQPQPQL PGHGSSAGSE QQQQITIGSS EELEADGGEG 1620 GGPDQQAVVA AATAAAPAAA AAALALYYVG GGGGGGVAGG GGGGAGVALQ QEYSVGGPGS 1680 AYYAQAQQPL LLLQAQAHQQ QQLQVPPPLF AAGVGVPTAA TVAAADGNTG WQWDGTPITA 1740 PSAAGATGSM LPPGLQYQPQ SPTQQYQAVR SPIPQQLPYY QSPQASQLQP QPMQSPPHQQ 1800 QQPQRQPQPH RQPQPQRQAM RTPFSDFWGM GAALAAVGPS AAGRQQQEDP PSSAGAAAMP 1860 QHQDFQVRVG PSSEWGRSIA EVGALRTMHQ QQLQHQLHQQ HPYQWQQAAP GAELQPEVGS 1920 GSGSGLATTA SAAVEAGEGC GVASTGGIGF RSATAAVAEA MAAPSLLHDA TSVVSTLGAT 1980 AAPQAQVHLP SPPAKQARQR EAQQPAGQLS DTPKRRRR*

Sequence ? help Back to Top

Protein Sequence Length: 2019 aa Download sequence Send to blast

MDLANAPSLG FFLAAAASGG SGGGLNGIGS GDGGGGGGGS SNGGGFADRL DTSRLASLDT  60
LAAAALAVEV EDEFGLGLAL GLGPPAGEAG GTGGGGLARP RSGLLLRARS VPLPHQQHQH  120
LQYVHAPSQC HAAAADCGGE ASAQAQPQPQ LDQQQRVRQL SRAAATPFAL GAPPPASPPA  180
ALDSAGGGGS GGAGAGAGLG GGDIGVPAAH TLSPPASPLH PAPAGPVVAP MRLQPATPPA  240
AGRGTAPAAT PFATAAAAAT GSASMPAAGT PGDLGDSQEQ GQQVEKAALP GSGNDATTSA  300
VSGGTCDGGT CDGGMPAPQT PSAAAKRDSK GGGGDGSLSG GGGSNGSRQL PHASQPRISA  360
PSAAGGGKNT TAAPASAPAS ADASASLLAG ANTASTPAQL PPLPPLPQPS RSSAKAPVVR  420
PGRPAGSPPP NTARGPLRQQ HLPDLSSLRP GGPSTSSRAS GSAGAAGTST ATKAKKGGQA  480
PARSKTPPRG RSDGAAAGAQ SEGTGGGGEA DSRQQKGAAD GGPRCRLPKR AAAVAAARRL  540
ADRSSGGGSQ AAEQEVVGGE VEEVGGEGVE EGQEEAEPVG SEEEDEEVNS SESHDGPGAE  600
AEPGAANGTL TAITAHMSPS PFRPAAPTTA RAPLAAPAAP AAPATTTAAD VVAGDAAALI  660
CWASPEPPPP LHQQQQPLLL PGPASSHAGD TAGAPGTVPS QLTRCTPGLS HAHISSASPE  720
AAPLPLQPHL PYPQPQPPAL GPPLQLQPPP SPHAPPHQLQ SPPKPEQLLS QPPRPPQPVG  780
GADLSPYLDV PSDIRCPEEL DLLPPLPPLP RLKLQPPGSK LQPSGSQPEQ QQRPGDALPL  840
GSATSSGAVK SSGVAKPPSP TLAGTKRQAP APAVPLASGA PAGGSRTAAA AAAGGDEQEP  900
QPPPAKKSKK KKKKGGGAGA ASGGGAAGAE GGAGGSPPRS LPPVSSLLGL PTPASAAAAA  960
AVAAAAAAAE VAAAACAGTP RPIKTNDKTV LRRERNRLAA KKCRAKKMEF IAQMQAQLDD  1020
MAQRNEELAT QLATLQRLHV RELHCKEVLK MVLQGCWDLP GGAASRLPYS ADAVLASLEA  1080
GTMDVGPLLD ALSGAAEPPP LRQPEQLQGQ GQHQQHQQTP RHLQQPQQAQ QPQKAQQLQY  1140
PQQQQQALMA PPGAPPASPH APSLDPGASP QQQGLLLPAP LHLPHGAPVL LPPSAASAGG  1200
AASAEVAAAA KAAVAAGVHL PQAGSVTDAT ASAGGAAATT PAFLPVAGGS GAFDTLQRQQ  1260
QPPQRQQQPQ AAAVEEEDED EDAADDRAAA EAEERRLPEP QPPAHMVGSG GGGGGGGNTF  1320
TALLRGGSLG FAASLQAASR AGFGGSATGY GAAGNGASGS AAAGSGGGGG SLTASGRLGS  1380
LDWLLLAAAS MDAGTANAIG AAVGGDPAGS TGGGAGENAG NDNSAGGQLP PPRPLDIPQL  1440
HGGSGGDGGV GSAAVAAAPD DGNATGYYVG DGGGGGGGPL SAFANLPYQP PHQQQQQQPQ  1500
AAPHAAALPQ QSAYWGQQPY GPLMPYPTEA APGSSAAGAP AALGTGLLPQ GHQEHGQGQG  1560
HQSPLQLQVP RHPPGHPGLH CLTQQPQPQL PGHGSSAGSE QQQQITIGSS EELEADGGEG  1620
GGPDQQAVVA AATAAAPAAA AAALALYYVG GGGGGGVAGG GGGGAGVALQ QEYSVGGPGS  1680
AYYAQAQQPL LLLQAQAHQQ QQLQVPPPLF AAGVGVPTAA TVAAADGNTG WQWDGTPITA  1740
PSAAGATGSM LPPGLQYQPQ SPTQQYQAVR SPIPQQLPYY QSPQASQLQP QPMQSPPHQQ  1800
QQPQRQPQPH RQPQPQRQAM RTPFSDFWGM GAALAAVGPS AAGRQQQEDP PSSAGAAAMP  1860
QHQDFQVRVG PSSEWGRSIA EVGALRTMHQ QQLQHQLHQQ HPYQWQQAAP GAELQPEVGS  1920
GSGSGLATTA SAAVEAGEGC GVASTGGIGF RSATAAVAEA MAAPSLLHDA TSVVSTLGAT  1980
AAPQAQVHLP SPPAKQARQR EAQQPAGQLS DTPKRRRR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	39	SGDGGGGGGGS
2	905	913	KKSKKKKKK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre01.g051174.t1.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3E823	0.0	A0A2K3E823_CHLRE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP11298	2	2

Link Out ? help Back to Top
Phytozome	Cre01.g051174.t1.1