PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre07.g318050.t1.2
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 803aa    MW: 82929.1 Da    PI: 6.6407
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre07.g318050.t1.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.2e-1448108363
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         +++++ r+ +NRe+Arr R+R+++e+ + e+ v+ ++ eN++Lk+ + +l+ ++++++++v
  Cre07.g318050.t1.2  48 DRRKALRRLRNRESARRVRARRLQEMSQMETTVQGMQDENTSLKEHVAKLQGHIQQMTMKV 108
                         67899****************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1145110IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.79548111IPR004827Basic-leucine zipper domain
PfamPF001703.9E-1149108IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-1250107No hitNo description
SuperFamilySSF579592.38E-950105No hitNo description
CDDcd146866.77E-135198No hitNo description
PROSITE patternPS0003605468IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 803 aa     Download sequence    Send to blast
MKSDITGSPS EGVGPRYTHD GMSAEHDLAS DDEPETEMEA LQHLAPEDRR KALRRLRNRE  60
SARRVRARRL QEMSQMETTV QGMQDENTSL KEHVAKLQGH IQQMTMKVYE VTAKYEAAVA  120
ENAQLRVELQ RSRPASIPGE GGFTLPTASL MAAQPPLLPS ALLAAAASQG PNSAPPLCQP  180
AAQQQQNQQS QMEKISVQVG GDGGAANTTA ATAPGCLSSL ALGSHAQLRN SNAMDLVQQR  240
AALDEVVMLL HEHKHRRNQQ GPDRSAGSEI ASSGAGNAVA GAVHVAPHAN SFSTGVNNNN  300
LNRSTGVHLH IRTSSILNDG SAVVRSGSGG YVAMAAPNAA SPALDMSGAA GAGLLPAYGS  360
GLAANTPSIN NAGGPGPVPL SFLTASGSAN SGATGVGAAG AAAGVGLGGH RASSPMDMIT  420
AASVAAASAG VVAAGGLGDG SGGRPSRSDG MVNMLQMTPQ QVTQQQLMAQ MQQQQSQQMA  480
AAAATSGSGG LGHLAVSYSM DTAFMTSQQQ QQQQQQQRLQ QQAQQLQAQQ QQQQAQGPSS  540
GIELSAGLSQ MQQPQQQQAL TGGSHSQPLL QHHLVAHHQQ FSLSGQQRGM VLDGVSNQLH  600
MAGQSQPLLQ LYQHHNTAAA DFGKMSAPFR SNAAGNEGGF GGDGALPTIP SSGTLTSNGQ  660
LSYLERGVLG GGSMYLGGTG GTGAGMAGSQ QVTFHSASFA MERRNGGTGL TGLPQPQPQQ  720
QQQQQQPFLS LASGLRGGAG GMNPSFLQLQ EQQAMMQQHG LGVEGWHLNA MAAGVAALKP  780
EDISEDMMMT LDELSPFVPQ DL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Cre.136030.0normal conditions
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre07.g318050.t1.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001700822.10.0predicted protein, partial
TrEMBLA0A2K3DIU50.0A0A2K3DIU5_CHLRE; Uncharacterized protein
STRINGEDP070760.0(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1413222