PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre09.g413050.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

bZIP

Protein Properties

Length: 1054aa MW: 106414 Da PI: 6.9189

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre09.g413050.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.9	2.5e-09	478	527	10	59
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +kNR+A+rr+RqR k++++ Le++ ++L + ++L+ e+e+l+ + l Cre09.g413050.t1.1 478 QEKNRSAQRRFRQRQKEKMAYLETRTEALAVQVEKLAGENESLRSMNGML 527 58*******************************99999999999987655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14688	6.71E-11	459	534	No hit	No description
SMART	SM00338	0.002	473	533	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.38E-8	477	531	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.6E-7	478	531	No hit	No description
Pfam	PF00170	1.5E-7	478	528	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1054 aa Download sequence Send to blast
MQPGDDDAAL ESYLDAFMGG SGFGGGGPVL TSSSFGQQSV AAPNGGFGMM QHQHQQQQQP 60 QLAGQMMGAA SGPGMQPVMQ PGMLGRPAST GVMMGQVSGQ GAMGGFGMSA GGDVDTSNMT 120 LPQLQQLLRQ RQAQQQQQQQ QMGFGAGAMG GYGGMGGVGG VLRPTSLQDH LTGGLGAGGM 180 APDPSQWRPA LGVVPSATGM QGFATPGSGQ FGEGMGCYGD SGAQSMFNTG LAAQQQAAAA 240 QQQQQQQQQQ QQLQQQQQQH AAALQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAVAQQ 300 QQQQQQQQVQ IQAHAQHVPI PVGGIMRPAS DSLLVNQRAS MGHMGLGLSG LGQNLASHHH 360 HHQQQQQQQQ QAISGSHQQQ PQPQASGPSV TIRPNSLSAQ TGAGGGGGGG GGTAGSGGNA 420 SAMTGTAAGP GGGGHGSKKT TWDAAAVAEG SDDSSAGEDS TQRRRVKGRS AAAPSLQQEK 480 NRSAQRRFRQ RQKEKMAYLE TRTEALAVQV EKLAGENESL RSMNGMLEKV LNLREEHISN 540 LQEAAKVFSG LNLGSGEGGG GGGGGAPDPS DPAYKAVQDA VTAAAHATAA SPAGGGVGGV 600 NSFSAGGGLL SLKSEEGSGG GGGGGGGGGG VGAMMDASGA GGGGGGGSSG GMMLPGGGHA 660 LPGPGLGMEA AGPGTRFTAE AIRAMSAEDV IEAWKENLKE LSRYVVLAEN NPPGQALPPG 720 VLSRITQLTA AMSELVHKVA MISPLAAKRL LATNMELHAM VPVPEPHWAR VLHLLGLGEQ 780 QRRDLLGARE RFLTKFEAVV QERVGLVNGL SQQAIPRSRV YADICASSLA AHEAADRLRA 840 NLQREHNINM EFVVFVFKGV LDLLQVATAA VHSYPYYPDV LAMANVLHAQ QGGGTAGTAA 900 GGAASTAGGS QVNTGVMQSP PLLGSTHSPS TTPQQQQQQA LAAQLAAQSL QTSLSGGGMG 960 SGGAAGGSGL QGAAAGMYGG MQHQQQQLTS QAGVSGSMGM SGMGIGMSGM MAMGGSGLMQ 1020 QHQQQQQGHP NQGQQGQGQQ GLSGMMDQDT AGT*

Sequence ? help Back to Top

Protein Sequence Length: 1054 aa Download sequence Send to blast

MQPGDDDAAL ESYLDAFMGG SGFGGGGPVL TSSSFGQQSV AAPNGGFGMM QHQHQQQQQP  60
QLAGQMMGAA SGPGMQPVMQ PGMLGRPAST GVMMGQVSGQ GAMGGFGMSA GGDVDTSNMT  120
LPQLQQLLRQ RQAQQQQQQQ QMGFGAGAMG GYGGMGGVGG VLRPTSLQDH LTGGLGAGGM  180
APDPSQWRPA LGVVPSATGM QGFATPGSGQ FGEGMGCYGD SGAQSMFNTG LAAQQQAAAA  240
QQQQQQQQQQ QQLQQQQQQH AAALQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAVAQQ  300
QQQQQQQQVQ IQAHAQHVPI PVGGIMRPAS DSLLVNQRAS MGHMGLGLSG LGQNLASHHH  360
HHQQQQQQQQ QAISGSHQQQ PQPQASGPSV TIRPNSLSAQ TGAGGGGGGG GGTAGSGGNA  420
SAMTGTAAGP GGGGHGSKKT TWDAAAVAEG SDDSSAGEDS TQRRRVKGRS AAAPSLQQEK  480
NRSAQRRFRQ RQKEKMAYLE TRTEALAVQV EKLAGENESL RSMNGMLEKV LNLREEHISN  540
LQEAAKVFSG LNLGSGEGGG GGGGGAPDPS DPAYKAVQDA VTAAAHATAA SPAGGGVGGV  600
NSFSAGGGLL SLKSEEGSGG GGGGGGGGGG VGAMMDASGA GGGGGGGSSG GMMLPGGGHA  660
LPGPGLGMEA AGPGTRFTAE AIRAMSAEDV IEAWKENLKE LSRYVVLAEN NPPGQALPPG  720
VLSRITQLTA AMSELVHKVA MISPLAAKRL LATNMELHAM VPVPEPHWAR VLHLLGLGEQ  780
QRRDLLGARE RFLTKFEAVV QERVGLVNGL SQQAIPRSRV YADICASSLA AHEAADRLRA  840
NLQREHNINM EFVVFVFKGV LDLLQVATAA VHSYPYYPDV LAMANVLHAQ QGGGTAGTAA  900
GGAASTAGGS QVNTGVMQSP PLLGSTHSPS TTPQQQQQQA LAAQLAAQSL QTSLSGGGMG  960
SGGAAGGSGL QGAAAGMYGG MQHQQQQLTS QAGVSGSMGM SGMGIGMSGM MAMGGSGLMQ  1020
QHQQQQQGHP NQGQQGQGQQ GLSGMMDQDT AGT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	637	647	SGAGGGGGGGS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre09.g413050.t1.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002951098.1	1e-161	hypothetical protein VOLCADRAFT_91555
TrEMBL	A0A2K3DFS6	0.0	A0A2K3DFS6_CHLRE; Uncharacterized protein
STRING	XP_002951098.1	1e-161	(Volvox carteri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP1904	6	6

Link Out ? help Back to Top
Phytozome	Cre09.g413050.t1.1