PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre10.g454850.t1.2

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

bZIP

Protein Properties

Length: 1364aa MW: 128662 Da PI: 8.622

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre10.g454850.t1.2	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38	3.5e-12	460	511	4	55
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 k+ r++kNR+AAr++R++K + + + +e+ keL + N+++k ++ ++ + Cre10.g454850.t1.2 460 EKAKERREKNRIAARKCRAKKVQMVRHMQEELKELVSANHEMKTQVVTWHRM 511 68899**************************************998888766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.2E-11	457	507	No hit	No description
SMART	SM00338	0.0026	457	525	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.737	459	505	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	1.4E-8	459	505	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.0E-9	460	510	No hit	No description
CDD	cd14809	9.10E-15	462	513	No hit	No description
PROSITE pattern	PS00036	0	465	479	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1364 aa Download sequence Send to blast
MASLRTGSLQ QPQLKKQPQQ STEEISPAAA SQQQRGKQQL LKPQQGKGKG KGKGFANKPP 60 SQAAATAAAA AAAVGLLDPG APAAAGGELL QPPAAPAAAT ASTSQSAENS CVSLDLGTGG 120 CWAASGAAAA PAAAAAAAGR GGAGSFLAAP SAEPSAPTVP AAGAAASAAR RNRSSSKAAG 180 SRGTQGKAAG GVGVATEQHQ LQPTGAAAAA AMTDSATGAV GPAAAATAAK QRGGSGGKRK 240 RGGEGAAAAA AVAAAAASEG ASGKPPPAKK AAKGKQGCSS SAAAKVQPDP SRLLMDLYDV 300 ADGGAAAAAT SSFLAGGGGA TDDATAAAVA AAVAAAVAAC GGGGGGGGSG GDGAGGGGGG 360 GFSGLGFGGF GDLDFDLNGD DIVSGSDAGE GAAATAGGAG GAGGAAAAAR RAATATTAGG 420 GEAMSCGEEG QATSAGGTTG GGGGGGGGLS TGAVPGEDPE KAKERREKNR IAARKCRAKK 480 VQMVRHMQEE LKELVSANHE MKTQVVTWHR MFSREVKLRE AMKRLILAVW GQPAARATGH 540 TANDVIIGLE SGTLDINGVS AMLHAAGGAA GPPPPHPPPP QPQPQQPYPA AGGAAATGAL 600 AAAAPPPPMP PGAGGSGGGA VVAPLPPGGG GAGPRLRPGP AALDVCGLLQ PPVLLPGGGS 660 SSVGGSSDGI MPPPPPPSLL PGPAGGGSGS STGNGACDLT PYPHAGRQPQ QPRTPLRPLQ 720 LPLPQTGSVS AAAAAAAAAS AAAAGPTSPR GVGSPTAAAM VPGAFAAASG GGGGVSSPFA 780 AAAIPRSPFA VGAAQASVQQ SELLAAAADV HSDAAVMPDA AAVPPPPLAP LPPPALPALP 840 SGGGSRRLPL LSSPFGSVVS PFPAGHGEEE PLAPPPLAPP PPPLSPASQR APRVGGGGAG 900 VSGFSPVANA SPFACMAAAG AADTAASDGT PPTPPAHMLA VNMTAATAAA AAAGAGATAA 960 AGTGGDGGGA AAQPGTTPSA LYSSSRLGGP SATASTLPVP AVAGTSSGGG ASGGGASGGD 1020 GDGDGRGGGG GGEGGVGGER ERSAFHAFSM GLGNGSLGPG VSLGLAALPS LEASFSLARL 1080 LSLQAVGGGG GGGGEAGGGG GYGGGVGDGG AGDGGGGGER LRLQEALRST SLGTLIQEQQ 1140 EQRAQAQQRE GQGHQSQQQP HHDHQTPLEA WLASLTNGGG GSGGGGTGGS GGGGGGGGGG 1200 SSQGTAAGAA VITPKAPAPP PPPQQQQQQQ QQQLQPAAVL LPSMRLPSLN LEGAPSSTLM 1260 ALSDPGLLLL RHDSGGMDWL AGLQQQGLQG LQQQHQQNQN QPQQQPQSQQ RGLGSQCKPR 1320 EEPHQSHQSH QNQQQQQRAA RSPPRPRSPR PPAPAHIKEE VCA*

Sequence ? help Back to Top

Protein Sequence Length: 1364 aa Download sequence Send to blast

MASLRTGSLQ QPQLKKQPQQ STEEISPAAA SQQQRGKQQL LKPQQGKGKG KGKGFANKPP  60
SQAAATAAAA AAAVGLLDPG APAAAGGELL QPPAAPAAAT ASTSQSAENS CVSLDLGTGG  120
CWAASGAAAA PAAAAAAAGR GGAGSFLAAP SAEPSAPTVP AAGAAASAAR RNRSSSKAAG  180
SRGTQGKAAG GVGVATEQHQ LQPTGAAAAA AMTDSATGAV GPAAAATAAK QRGGSGGKRK  240
RGGEGAAAAA AVAAAAASEG ASGKPPPAKK AAKGKQGCSS SAAAKVQPDP SRLLMDLYDV  300
ADGGAAAAAT SSFLAGGGGA TDDATAAAVA AAVAAAVAAC GGGGGGGGSG GDGAGGGGGG  360
GFSGLGFGGF GDLDFDLNGD DIVSGSDAGE GAAATAGGAG GAGGAAAAAR RAATATTAGG  420
GEAMSCGEEG QATSAGGTTG GGGGGGGGLS TGAVPGEDPE KAKERREKNR IAARKCRAKK  480
VQMVRHMQEE LKELVSANHE MKTQVVTWHR MFSREVKLRE AMKRLILAVW GQPAARATGH  540
TANDVIIGLE SGTLDINGVS AMLHAAGGAA GPPPPHPPPP QPQPQQPYPA AGGAAATGAL  600
AAAAPPPPMP PGAGGSGGGA VVAPLPPGGG GAGPRLRPGP AALDVCGLLQ PPVLLPGGGS  660
SSVGGSSDGI MPPPPPPSLL PGPAGGGSGS STGNGACDLT PYPHAGRQPQ QPRTPLRPLQ  720
LPLPQTGSVS AAAAAAAAAS AAAAGPTSPR GVGSPTAAAM VPGAFAAASG GGGGVSSPFA  780
AAAIPRSPFA VGAAQASVQQ SELLAAAADV HSDAAVMPDA AAVPPPPLAP LPPPALPALP  840
SGGGSRRLPL LSSPFGSVVS PFPAGHGEEE PLAPPPLAPP PPPLSPASQR APRVGGGGAG  900
VSGFSPVANA SPFACMAAAG AADTAASDGT PPTPPAHMLA VNMTAATAAA AAAGAGATAA  960
AGTGGDGGGA AAQPGTTPSA LYSSSRLGGP SATASTLPVP AVAGTSSGGG ASGGGASGGD  1020
GDGDGRGGGG GGEGGVGGER ERSAFHAFSM GLGNGSLGPG VSLGLAALPS LEASFSLARL  1080
LSLQAVGGGG GGGGEAGGGG GYGGGVGDGG AGDGGGGGER LRLQEALRST SLGTLIQEQQ  1140
EQRAQAQQRE GQGHQSQQQP HHDHQTPLEA WLASLTNGGG GSGGGGTGGS GGGGGGGGGG  1200
SSQGTAAGAA VITPKAPAPP PPPQQQQQQQ QQQLQPAAVL LPSMRLPSLN LEGAPSSTLM  1260
ALSDPGLLLL RHDSGGMDWL AGLQQQGLQG LQQQHQQNQN QPQQQPQSQQ RGLGSQCKPR  1320
EEPHQSHQSH QNQQQQQRAA RSPPRPRSPR PPAPAHIKEE VCA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1189	1200	SGGGGGGGGGGS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre10.g454850.t1.2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3DBG2	0.0	A0A2K3DBG2_CHLRE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP8908	4	4

Link Out ? help Back to Top
Phytozome	Cre10.g454850.t1.2