PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre12.g489000.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

bZIP

Protein Properties

Length: 981aa MW: 97079.6 Da PI: 6.8382

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre12.g489000.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.8	1.3e-09	42	103	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ +r rr+ NR +A+rsR ++++e+ Le+ ++eL++e ++L+ el +++ +l+se Cre12.g489000.t1.1 42 EEDERRKRRLLANRKSAQRSRVKRLEEVGVLETLCEELSKEVDELRTELTTWRARQRELRSE 103 577899**********************************************9888888775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.7E-9	39	102	No hit	No description
SMART	SM00338	2.5E-8	42	106	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.6E-7	43	103	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.668	44	107	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.94E-6	46	101	No hit	No description
CDD	cd14703	8.42E-12	47	98	No hit	No description
PROSITE pattern	PS00036	0	49	64	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:2.60.120.10	3.5E-4	449	480	IPR014710	RmlC-like jelly roll fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence Send to blast
MARGKRKDAS GSNEDEHHPA GRKPGRTSAK KQKGLEDHGT SEEDERRKRR LLANRKSAQR 60 SRVKRLEEVG VLETLCEELS KEVDELRTEL TTWRARQREL RSEHGKFVSR LALHGVQVDE 120 EPVPEVLAVP DVVLPPRPRK AAVDDEGEEE SGDADSVGDD AELLGDGSEP AGADEDVKMV 180 TEAGAEGDGD GGGVDLDMVA AGTLGVKAET PSRTHTAVAP SPQPVQHPPS SQPHGQQPGG 240 PAAQPAQAQP QAHNGASGQL QRQPLQDAQQ RRNSGGSAGA GAGAAAGAGG ASCAAIGARH 300 AAQGAAYGAA ASGVAGVLLE PCSVRGAAGS HHVGQLTTFG SSSAAGAGPT AAALYASGSG 360 GYGLSPAEPL AASPLSGSAL AAAASGPSQA SAAAMAGTGA APTPPGYSTG EGSGGSSVAQ 420 PMLGRQAGVL MYPEPPSYYC CPGVQQAPLG PQQQQQQQQQ QQQQQQQQQQ QQSHHQAQHQ 480 PPPPPPQKLT PHQSLGGHHH PHRGPQLAPR PSGHHQPTHA SQQLRHHNSQ PLPLKSGGNS 540 ADLQGFASFP ACAVSGYSGG SGLHRGRSGI AAAAALAAAT ALASGRIGPA ELKRVASIPS 600 AGDVAPHHQH GLMSSGSGGA GSGMPGHSAT RHPDPPHALG GGAVASGGPN MCGPSAAVSG 660 GCGGLAAAAA PLEPHQHLHG SASVPWGGFG RATCGAHAGG PHGLHLQHHR HNLVPTAAAV 720 ASPAAAAAAE AAAASQGVLS NAGTANGHNL QPLLLPAHPE DPDAALWSDL CGPSSDLHRR 780 APAAGGATGA AGGSATPMQL DVECDPAGPL FGFGGSRRGS VDSLGILGCG SAGGSDSGRG 840 DGGGQFRDVA QGAMSMGPAV GASVATAGGV AMRMVVAGAG TGADAATVAA HAGRRMSLSG 900 GESAGSGRGS KRSGSSDSGR SLTYVQLTEG LRGTPKATAA VVAAAGTALS MDIGELPNDA 960 LSAYQDGDGG LLLDGWDLGL *

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence Send to blast

MARGKRKDAS GSNEDEHHPA GRKPGRTSAK KQKGLEDHGT SEEDERRKRR LLANRKSAQR  60
SRVKRLEEVG VLETLCEELS KEVDELRTEL TTWRARQREL RSEHGKFVSR LALHGVQVDE  120
EPVPEVLAVP DVVLPPRPRK AAVDDEGEEE SGDADSVGDD AELLGDGSEP AGADEDVKMV  180
TEAGAEGDGD GGGVDLDMVA AGTLGVKAET PSRTHTAVAP SPQPVQHPPS SQPHGQQPGG  240
PAAQPAQAQP QAHNGASGQL QRQPLQDAQQ RRNSGGSAGA GAGAAAGAGG ASCAAIGARH  300
AAQGAAYGAA ASGVAGVLLE PCSVRGAAGS HHVGQLTTFG SSSAAGAGPT AAALYASGSG  360
GYGLSPAEPL AASPLSGSAL AAAASGPSQA SAAAMAGTGA APTPPGYSTG EGSGGSSVAQ  420
PMLGRQAGVL MYPEPPSYYC CPGVQQAPLG PQQQQQQQQQ QQQQQQQQQQ QQSHHQAQHQ  480
PPPPPPQKLT PHQSLGGHHH PHRGPQLAPR PSGHHQPTHA SQQLRHHNSQ PLPLKSGGNS  540
ADLQGFASFP ACAVSGYSGG SGLHRGRSGI AAAAALAAAT ALASGRIGPA ELKRVASIPS  600
AGDVAPHHQH GLMSSGSGGA GSGMPGHSAT RHPDPPHALG GGAVASGGPN MCGPSAAVSG  660
GCGGLAAAAA PLEPHQHLHG SASVPWGGFG RATCGAHAGG PHGLHLQHHR HNLVPTAAAV  720
ASPAAAAAAE AAAASQGVLS NAGTANGHNL QPLLLPAHPE DPDAALWSDL CGPSSDLHRR  780
APAAGGATGA AGGSATPMQL DVECDPAGPL FGFGGSRRGS VDSLGILGCG SAGGSDSGRG  840
DGGGQFRDVA QGAMSMGPAV GASVATAGGV AMRMVVAGAG TGADAATVAA HAGRRMSLSG  900
GESAGSGRGS KRSGSSDSGR SLTYVQLTEG LRGTPKATAA VVAAAGTALS MDIGELPNDA  960
LSAYQDGDGG LLLDGWDLGL *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre12.g489000.t1.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3D286	0.0	A0A2K3D286_CHLRE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP12240	3	3

Link Out ? help Back to Top
Phytozome	Cre12.g489000.t1.1