PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre12.g557300.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

bZIP

Protein Properties

Length: 1527aa MW: 154908 Da PI: 9.6768

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre12.g557300.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.3	8e-09	1161	1208	2	49
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++l e r+ +NReAA +sR+R+ ++++ Le+ + +L++ aL+ l Cre12.g557300.t1.1 1161 RALTQEERMLRNREAAAKSRARRHQYQQSLEQHILALQTHSAALRRLL 1208 578899********************************9999999655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.887	1162	1210	IPR004827	Basic-leucine zipper domain
CDD	cd14707	9.49E-16	1164	1218	No hit	No description
SuperFamily	SSF57959	4.82E-6	1165	1208	No hit	No description
Pfam	PF07716	4.4E-6	1166	1210	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.0E-8	1166	1209	No hit	No description
PROSITE pattern	PS00036	0	1168	1182	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1527 aa Download sequence Send to blast
MDDVAAGRTA GRSADADEQK PTLGTAGIGP AVRGVSGPGM NPMETGMLRR PSEVAGRDPG 60 QARRPSEDDS WNPETLRTAS LLSHGRTYDM SKRESCTDSS TGAEFLLAGS YGLPPGGRRI 120 TSTTASHAAV GVPGGNAGGG QNSMLGPGQS FASGGAGRLG SFTSGSSQLG LRPPPLSIPS 180 PSGLAGQVPL LSHQHQQHSS QGPAGEGMHS TAPSTHQSGA RSRQLHSFGA PSTSGILPER 240 WSAGEGASGA GRGDAQPPQP GQMGLPPLPS RAMRGGPGHA ATTLSGGVGQ SAEAGEQRHG 300 LTPQLTGPGL GQGAGEMLGS AVVTTGAPGR APTPPQGGGG QAGAAAAGEL REDQLLSTTR 360 LGAPQLFGPG QGDNEARMPP ISAMLGLPGG PVADDDDRHA PASAFLEFAN EPGFASGPSG 420 RGAGGAPPSP THLVMAAMQA GQQFRSASLS SLSMQQMAAT PGAGQHGVAG LLGQRQGTVD 480 GPLGRPQSLN LPGTGGYEAV NLPGPGYAAA AAMAAAGAGD GGGYGGHALG SRSSPRHASQ 540 QSPRLFHQFQ QSGQMPSHFM QQQQQQQQQQ QQQQQQQLQA QQQLMYGQQQ QQGLDSPRMQ 600 MAPGPAMQAG QQQVLQQQQQ QHQAPSPYDD RQGVRPASPY GMDLQQQQQF LASQAAMREL 660 AMGAMRSQQL IPGLTRIASG VGAGSGGGGA GGGSYRTTLD GHSGQPGMHA QQQHHAASMA 720 QHQQQQQQQQ HTGSLAQAQY QQAMQRAGSH PHTLLSAQHQ QQQQHQQHQQ HQQQQQHQQQ 780 QQQQQHQQQQ LHQQQLAQRL DMLEQQQLEQ QRAASLSGVG LLSQGRAHPS PFHLQVNTGL 840 SGMDTAVYQS AGALDSPLAH RQHSLQLQQR QQSDMYSQQQ MLAQQGEASG FAGHQRGPSS 900 PGVNPWLFQQ QQQQQQQQLQ QQLSQPEPLG GALASGVVGD VGLGGERDAA AAAQARASRQ 960 LKRRRTSPHP SIARSASGGG VSGLEQGGGV QVPSSGPAPS SQPSGLRALV RDSGSVRRRQ 1020 NSASGGTGSG PTASAGAGQA TASAGGGLTL ADAAGSGQLG SGAPAATTVP TRALYMSDDE 1080 DAEFLSQGES QEESSSQGTP GEEREGGRTR RGGGRQGGTA SGRGGGGSLL MPLGDVSDGG 1140 FTGGGGSMVE IDPVTGQMRR RALTQEERML RNREAAAKSR ARRHQYQQSL EQHILALQTH 1200 SAALRRLLEQ NGISLPAPLR EQQAALGDGL PPPPRRNSPP RSRKGIGGRP RKYPLNPDGS 1260 KPTRSRRRTS TGTALTTAGW EGGAAEQAEG GEEAAGGGVS EGAGGTAGGS GGGARGGRGA 1320 GRGRRGAGSR GGKSAARGGR GRGRSSGGTR RDEEEGDDGE EGHGGSGQEE ELPGARGAAS 1380 GLLGQSSDPP NTSGTGAGGS VVIAGAVQEP RLSVSALTGL AKTQVQAGAA RGGGIAPAWS 1440 QPQPLGADGA AGGSGLAGAS LSAPLPGAGG GLLAPGGGGQ QGVHGGAGGA EAAEGAAAGQ 1500 QHQDHFDMLA IGSYSDLMTT LFSEGQ*

Sequence ? help Back to Top

Protein Sequence Length: 1527 aa Download sequence Send to blast

MDDVAAGRTA GRSADADEQK PTLGTAGIGP AVRGVSGPGM NPMETGMLRR PSEVAGRDPG  60
QARRPSEDDS WNPETLRTAS LLSHGRTYDM SKRESCTDSS TGAEFLLAGS YGLPPGGRRI  120
TSTTASHAAV GVPGGNAGGG QNSMLGPGQS FASGGAGRLG SFTSGSSQLG LRPPPLSIPS  180
PSGLAGQVPL LSHQHQQHSS QGPAGEGMHS TAPSTHQSGA RSRQLHSFGA PSTSGILPER  240
WSAGEGASGA GRGDAQPPQP GQMGLPPLPS RAMRGGPGHA ATTLSGGVGQ SAEAGEQRHG  300
LTPQLTGPGL GQGAGEMLGS AVVTTGAPGR APTPPQGGGG QAGAAAAGEL REDQLLSTTR  360
LGAPQLFGPG QGDNEARMPP ISAMLGLPGG PVADDDDRHA PASAFLEFAN EPGFASGPSG  420
RGAGGAPPSP THLVMAAMQA GQQFRSASLS SLSMQQMAAT PGAGQHGVAG LLGQRQGTVD  480
GPLGRPQSLN LPGTGGYEAV NLPGPGYAAA AAMAAAGAGD GGGYGGHALG SRSSPRHASQ  540
QSPRLFHQFQ QSGQMPSHFM QQQQQQQQQQ QQQQQQQLQA QQQLMYGQQQ QQGLDSPRMQ  600
MAPGPAMQAG QQQVLQQQQQ QHQAPSPYDD RQGVRPASPY GMDLQQQQQF LASQAAMREL  660
AMGAMRSQQL IPGLTRIASG VGAGSGGGGA GGGSYRTTLD GHSGQPGMHA QQQHHAASMA  720
QHQQQQQQQQ HTGSLAQAQY QQAMQRAGSH PHTLLSAQHQ QQQQHQQHQQ HQQQQQHQQQ  780
QQQQQHQQQQ LHQQQLAQRL DMLEQQQLEQ QRAASLSGVG LLSQGRAHPS PFHLQVNTGL  840
SGMDTAVYQS AGALDSPLAH RQHSLQLQQR QQSDMYSQQQ MLAQQGEASG FAGHQRGPSS  900
PGVNPWLFQQ QQQQQQQQLQ QQLSQPEPLG GALASGVVGD VGLGGERDAA AAAQARASRQ  960
LKRRRTSPHP SIARSASGGG VSGLEQGGGV QVPSSGPAPS SQPSGLRALV RDSGSVRRRQ  1020
NSASGGTGSG PTASAGAGQA TASAGGGLTL ADAAGSGQLG SGAPAATTVP TRALYMSDDE  1080
DAEFLSQGES QEESSSQGTP GEEREGGRTR RGGGRQGGTA SGRGGGGSLL MPLGDVSDGG  1140
FTGGGGSMVE IDPVTGQMRR RALTQEERML RNREAAAKSR ARRHQYQQSL EQHILALQTH  1200
SAALRRLLEQ NGISLPAPLR EQQAALGDGL PPPPRRNSPP RSRKGIGGRP RKYPLNPDGS  1260
KPTRSRRRTS TGTALTTAGW EGGAAEQAEG GEEAAGGGVS EGAGGTAGGS GGGARGGRGA  1320
GRGRRGAGSR GGKSAARGGR GRGRSSGGTR RDEEEGDDGE EGHGGSGQEE ELPGARGAAS  1380
GLLGQSSDPP NTSGTGAGGS VVIAGAVQEP RLSVSALTGL AKTQVQAGAA RGGGIAPAWS  1440
QPQPLGADGA AGGSGLAGAS LSAPLPGAGG GLLAPGGGGQ QGVHGGAGGA EAAEGAAAGQ  1500
QHQDHFDMLA IGSYSDLMTT LFSEGQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1105	1113	GGRTRRGGG
2	1314	1322	RGGRGAGRG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre12.g557300.t1.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3D5Q1	0.0	A0A2K3D5Q1_CHLRE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP14371	2	2

Link Out ? help Back to Top
Phytozome	Cre12.g557300.t1.1