PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre16.g667150.t1.2
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bHLH
Protein Properties Length: 227aa    MW: 23604.1 Da    PI: 8.9618
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre16.g667150.t1.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000611411611030
                         HHHHHHHHHHHHHHHCTSCCC CS
                 HLH  10 rrRRdriNsafeeLrellPka 30 
                         r  R+ iN+++  L++l+P++
  Cre16.g667150.t1.2 141 RILRQGINNSLKDLKSLIPNS 161
                         56799**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MAPGPIDQDL WFGLDKLEHW LACGFCTLVT YWLCKRHYRL FRGRFTFGLL VGLLVGLLKE  60
LGDYLQLWPG ALSGKDLVAD VAGSVCAAAG LYLVEAKWGP PQPPHVDRHA AGCWGTIRSV  120
LGLSNEPRVV DLEHGLVYGQ RILRQGINNS LKDLKSLIPN SGALTRWGNL YGYKPLAVGG  180
GGGGRGGLGL GGGGGGGGIS SGGAVGSGGA MELHQTASKR ADPSSA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre16.g667150.t1.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001691966.11e-127predicted protein, partial
TrEMBLA0A2K3CUJ21e-158A0A2K3CUJ2_CHLRE; Uncharacterized protein
STRINGEDP044561e-126(Chlamydomonas reinhardtii)