PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre16.g692250.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

bZIP

Protein Properties

Length: 1526aa MW: 153085 Da PI: 5.1682

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre16.g692250.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47	5.6e-15	987	1047	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rerrk++NRe+Arr+R+R++ae +eL +k +L + N++L+ ++e+++ ++ ++++++ Cre16.g692250.t1.1 987 ADRRERRKESNRESARRCRLRREAEGAELGKKTNVLAGTNDMLRAQVEQMEATANRMEDQN 1047 799**************************************************99999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.4E-10	985	1046	No hit	No description
SMART	SM00338	6.1E-14	985	1049	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.553	987	1050	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.5E-13	987	1047	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.98E-8	989	1044	No hit	No description
CDD	cd14702	1.41E-13	990	1037	No hit	No description
PROSITE pattern	PS00036	0	992	1007	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1526 aa Download sequence Send to blast
MQASLSETLG PGAAYLQPRP AGPGPPYGSA YMTGLPEAAG AAAQYLPMAA LGTARPNFYG 60 LDPAAAAAAA AAAAANAAGQ AQGGFLPYPV PPAGFSSPFT TGTTAPVLTT VPSSLVTATS 120 NAAVEVQPLI SSPGQGPYGM WAGNDLASDR SETGYAAPTA GYPPGYLQQL QLQQYQQQPQ 180 QQQQQQQQVP DAGAAAAAYG GAGAPVPGYP QAMGGSPATN PADYWRQLAA AALGGGAAHS 240 TPGQAPGDLQ ALYLQQLQQQ QQQQQLQQQQ QQQQAAAAAL QFAYLQQQQQ QQLQQQLQAC 300 GMQGLLRLPG AGVPGAPPGL PLDPSQGPAA QLQHLLMLQQ VQQAQQQQQQ QQQQQQQQQQ 360 QQQQQQQQQA QAPGAPFGMM GSLSDPALAA AVATALQLLQ LPANLRALAA ANMPPNAIQQ 420 QQQLQQFHQQ QQQQLVQQQQ LQQLQLQLAG YPPGAAPGYG AASGLLALIP QLQGQAAYAA 480 GMDPAAIAAA AAAAGAAAAA QQQQQQLQQQ PGPGLAMQQQ QQFQQQQQQD YAGFGLMSPV 540 EPQSGAQPGS GGPALPDSPQ LHGGYSGDYG GLFAAEDMEG GVDTRTSEEA RMEAAAAVGG 600 NDGPGLQQQQ QQQQLGPLSA QMQEEQASEQ QPQLPQLPVL PSATEQYQGG QGQDLVRPHS 660 RPPSDQGMAQ PPAPQSNPPP LQQPIRPVPA IPLAIPHATG TGPPGHFQQP AFMSALLATS 720 SNPNLGFAGP NTPAGSTPPA LPDAATAAVD GGRAGGGPGS PQRSASPSQS MSQTDTEEED 780 DDDDEDTSAS PSPSPAVSPR ASPDRCSQQL QAQLQAQLQQ QLQQQQQQLL QSQPSMDMGG 840 QGSMTGMGGL TPAAALLFLG LQQQQQQRQL QAQQQQHHSV AVAAAAAAAA AAAAAEQSSG 900 CMHPLAAAAL QQFQDASSLS SAAHLSSLAP AYAPSSAAAV AHHTLSAAAT GAAAPLRPAS 960 VATTGRGGGG GGGGGTSRTT SRKRTAADRR ERRKESNRES ARRCRLRREA EGAELGKKTN 1020 VLAGTNDMLR AQVEQMEATA NRMEDQNVIL SQWLQHIESA GDDAPAAAAT ILECIRQQDA 1080 AQIAAAAVQQ MQAAIQGQAA AALDAGGWDG AAAGKDQMAG DPGSLDGETE PDTDDDDGAA 1140 GDAAAARRPA GQASPQGAGT PGSGRAKGGG AKGGGARRQQ PKPKSKKEPA ADGGDAVQDG 1200 TQSAGPARAA AGRGAGAGKT AKRKKPSDGG AMQGTPTGAA AEAGRPEAAA GGEDANAAAQ 1260 LIAGSEGERG RSTQRQRQEP PQQRPGGGTA TDGACTSAAA GASGHPSQAV RSASGAATAG 1320 GAKRKRAQAG ADDGSGSPQR SGAQEHAGAR VAAGGAGRTR PRSGGSGASG GNSRGNGYTN 1380 GGRGRSPVAG GSNTGLTTAS AAASEDWAML QEDLRTPELG QQTGEDVTNA GAAVAAGPSA 1440 RAGGRRGAAS LASPQPLPPG VLGSGLTLAC PSPSVDMMLM AAAADRSLGG LAGEDSRCGS 1500 LEGSGGMGGA GGSGGCGSGG SSRRL*

Sequence ? help Back to Top

Protein Sequence Length: 1526 aa Download sequence Send to blast

MQASLSETLG PGAAYLQPRP AGPGPPYGSA YMTGLPEAAG AAAQYLPMAA LGTARPNFYG  60
LDPAAAAAAA AAAAANAAGQ AQGGFLPYPV PPAGFSSPFT TGTTAPVLTT VPSSLVTATS  120
NAAVEVQPLI SSPGQGPYGM WAGNDLASDR SETGYAAPTA GYPPGYLQQL QLQQYQQQPQ  180
QQQQQQQQVP DAGAAAAAYG GAGAPVPGYP QAMGGSPATN PADYWRQLAA AALGGGAAHS  240
TPGQAPGDLQ ALYLQQLQQQ QQQQQLQQQQ QQQQAAAAAL QFAYLQQQQQ QQLQQQLQAC  300
GMQGLLRLPG AGVPGAPPGL PLDPSQGPAA QLQHLLMLQQ VQQAQQQQQQ QQQQQQQQQQ  360
QQQQQQQQQA QAPGAPFGMM GSLSDPALAA AVATALQLLQ LPANLRALAA ANMPPNAIQQ  420
QQQLQQFHQQ QQQQLVQQQQ LQQLQLQLAG YPPGAAPGYG AASGLLALIP QLQGQAAYAA  480
GMDPAAIAAA AAAAGAAAAA QQQQQQLQQQ PGPGLAMQQQ QQFQQQQQQD YAGFGLMSPV  540
EPQSGAQPGS GGPALPDSPQ LHGGYSGDYG GLFAAEDMEG GVDTRTSEEA RMEAAAAVGG  600
NDGPGLQQQQ QQQQLGPLSA QMQEEQASEQ QPQLPQLPVL PSATEQYQGG QGQDLVRPHS  660
RPPSDQGMAQ PPAPQSNPPP LQQPIRPVPA IPLAIPHATG TGPPGHFQQP AFMSALLATS  720
SNPNLGFAGP NTPAGSTPPA LPDAATAAVD GGRAGGGPGS PQRSASPSQS MSQTDTEEED  780
DDDDEDTSAS PSPSPAVSPR ASPDRCSQQL QAQLQAQLQQ QLQQQQQQLL QSQPSMDMGG  840
QGSMTGMGGL TPAAALLFLG LQQQQQQRQL QAQQQQHHSV AVAAAAAAAA AAAAAEQSSG  900
CMHPLAAAAL QQFQDASSLS SAAHLSSLAP AYAPSSAAAV AHHTLSAAAT GAAAPLRPAS  960
VATTGRGGGG GGGGGTSRTT SRKRTAADRR ERRKESNRES ARRCRLRREA EGAELGKKTN  1020
VLAGTNDMLR AQVEQMEATA NRMEDQNVIL SQWLQHIESA GDDAPAAAAT ILECIRQQDA  1080
AQIAAAAVQQ MQAAIQGQAA AALDAGGWDG AAAGKDQMAG DPGSLDGETE PDTDDDDGAA  1140
GDAAAARRPA GQASPQGAGT PGSGRAKGGG AKGGGARRQQ PKPKSKKEPA ADGGDAVQDG  1200
TQSAGPARAA AGRGAGAGKT AKRKKPSDGG AMQGTPTGAA AEAGRPEAAA GGEDANAAAQ  1260
LIAGSEGERG RSTQRQRQEP PQQRPGGGTA TDGACTSAAA GASGHPSQAV RSASGAATAG  1320
GAKRKRAQAG ADDGSGSPQR SGAQEHAGAR VAAGGAGRTR PRSGGSGASG GNSRGNGYTN  1380
GGRGRSPVAG GSNTGLTTAS AAASEDWAML QEDLRTPELG QQTGEDVTNA GAAVAAGPSA  1440
RAGGRRGAAS LASPQPLPPG VLGSGLTLAC PSPSVDMMLM AAAADRSLGG LAGEDSRCGS  1500
LEGSGGMGGA GGSGGCGSGG SSRRL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	750	756	GGRAGGG
2	963	975	TGRGGGGGGGGGT
3	1001	1008	RRCRLRRE

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00173	DAP	Transfer from AT1G32150	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre16.g692250.t1.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	-	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3CSK2	0.0	A0A2K3CSK2_CHLRE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP14478	2	2
Representative plant	OGRP700	17	67

Link Out ? help Back to Top
Phytozome	Cre16.g692250.t1.1