PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre17.g746547.t1.1
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 768aa    MW: 75438.7 Da    PI: 6.4843
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre17.g746547.t1.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.52.5e-07353391543
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                         kr+rr + NR +A rsR +K++ i eLe++v +  a  +
  Cre17.g746547.t1.1 353 KRARRIIANRQSAHRSRMKKLQLIHELEQRVTTARAATD 391
                         9******************************87666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-4349413IPR004827Basic-leucine zipper domain
PfamPF077161.7E-4351397IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-6353407No hitNo description
SuperFamilySSF579592.25E-6353397No hitNo description
CDDcd147033.00E-14354406No hitNo description
PROSITE patternPS000360356371IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009555Biological Processpollen development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    Send to blast
MHQTPNRRRV QHRKHPSDTF AWAASALLTE LPPGSLPNAT GASAGQLHHP AHGPSPLYPG  60
GPTADAAALA LGPGGLGGSI LPDDLLDLLR DVDEDNLHLD LDEVCTDGIV DTSEDLNVLE  120
SQLAASGQQS HSAGAAPGAP ALAGLHTSAA GAPAQAPGSA AQQGGTSHFG LPGHSVVTTS  180
AAGLLLGLPG DMARQQQHQQ QASDQQQTGA RANGRRACRR GSDEPAEEVN AMDSPSSSPA  240
GAGKVSQRGR KAAAASGAAA TKRGTSASGA GSGPDEGGAP GNNGSGSFAL PLSTGGGARS  300
RHRRSPSDLS EPSASGLPGA LPLPLPLVAD KPLSEFVGQT RANALDPAQL DPKRARRIIA  360
NRQSAHRSRM KKLQLIHELE QRVTTARAAT DAVRQQNVAA AERRRELLTA AATAQQQLAE  420
LRREAAAVAA MHSALAAELA KIGIAGPPPA PAAAEPAAAP ADGMEVGLRG SSGGAVAPAT  480
PPNGSEVGAE LHGRMSVNGA ATRAAGGPSA SGSSGTSASM GQAGAAGSQP GGAAVPESPF  540
LLPHLPPPHI MSAHTAAAAG SGGGGGSFSN HHHHHHSHSH SGSGSAMPLL SAPGAASYTF  600
GQQHNPAHQQ QHQQQPAPFL QGALPQHTQL AHPAPSHSRN PSASSLAGPA PSQPSAAVEA  660
AAAFQQAPTA ADVTPEPGAR QDGGGGGGGE VAHGSSPMAL DGFGLAGLMG LGMGNDGLAG  720
GGGIGGGGGE GEAGAVGDSD TDVGDFLLMG MGDGDGDDTA PTDGAGL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Cre.107812e-49normal conditions
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre17.g746547.t1.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3CS560.0A0A2K3CS56_CHLRE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1052944
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-08bZIP family protein