PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre19.g750947.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

ERF

Protein Properties

Length: 1323aa MW: 120619 Da PI: 6.7329

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre19.g750947.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.1	2.1e-13	70	119	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+w+kk++rW A I + k+ +lg+++t+ eAa+ ++a+ +++g Cre19.g750947.t1.1 70 SKFRGVCWNKKNKRWQAAINS------SgKYLYLGSYDTEAEAAAVFDRAAIRIRG 119 79**************888......44******99***********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00018	5.28E-14	70	126	No hit	No description
SuperFamily	SSF54171	5.04E-14	70	128	IPR016177	DNA-binding domain
Pfam	PF00847	3.1E-8	70	119	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	6.2E-13	71	127	IPR001471	AP2/ERF domain
SMART	SM00380	3.9E-14	71	133	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	14.434	71	127	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1323 aa Download sequence Send to blast
MDVVIKTEEA DQGRDDEATA RREFADHGGT AGAGLEGLPG ESLEAQRQRE EILKHGTKAV 60 AVSSNKQLTS KFRGVCWNKK NKRWQAAINS SGKYLYLGSY DTEAEAAAVF DRAAIRIRGP 120 KARLNFSYAD YVDASGNLKP DPAIDEMIQE AAAPAKPRRP RGGGGGGGGG GGRGGAAAAG 180 GDDAPTPRRG GGAGGRRRRG GGGGGAASGG NDEDEDWSEG LEEAPPARRH RGNARTGGGG 240 GGGGGGAGPQ AGFVDDGGGD DGPGGMPLDL QALLPDGGGG LGGGGLGALA GLGGNSGLGG 300 GGGGGGGGPQ RRSLMGRMLG QEEEAALSAL AEVAGAAAAA NGNGNGRGAN GNGGAAAANR 360 LATLGALDLS MGGGSSGGGG GGGLGARGTL SGISGGGLGG GGGGGGVSSG MMMGSLEELL 420 SYGRDGGGGG GLSGLGGLGG GNSGLLTSSG VKGLGGGNGG SLRGLVDGLG LGGGGLGGGG 480 GGGLGGGGHM GLLGGRGQGQ GQSGMSGGGL SGLMGSLGRG GGGGGGGGGG GFHGHGLLGS 540 LEDRSLAAAL AAAAGGGGAA AENDLRAALS HADQASAAIA RLRNRGGGGG GGGGGGGGGD 600 SSTAALLLQQ IHGGGGGGGG GGGLSGIGGG VSEDLAELLA SATGNHGGGG ALGMLRSGGG 660 NRLAPQFGRG QPSLLGGGGG GGFGGGGGGG FGGSGGRLSS LGVALRGGGG AGGGASRQLA 720 MLLQPDPDGD ADAVNDVASA LGLSFGGGGG GGNGGFNSSL FADLSGSLAS LANGIRKVPA 780 LHTGLPSLMT PAGGGGGGGG GGGGGGDGDG RGVNGLAAAA AALGGIGIKH EPMAAAEAAA 840 ATAGGGNGGG GGSGGGGGGS GYSLAALAKA LPAGCQLEAV VQSGGLAHIM GVLYTLPPGG 900 GGGGNGGGVC AAVWNGRVGR FTTLGSFANL DAARAACQAP LAVLQDAELA YAPPPPPAAV 960 AAAGAGGGGG GEGGRFKADP SGNGNHGNGS NAVLVLSAAA AERERDRDRD RDFQNHDLGF 1020 GGTAPYGGLP RPGGGGGGGG GSRLSAGATL DLAAPPLDDG LGLGGGGGGG GRWGGVSGRL 1080 SALSGFSGLS GLSSYLAGAT QPDPLPSALA GGGGGVGGGG GASVSARSGD TGSAAGGGSG 1140 GVSRTSGASS GAATAAVAAA AAQRGGGGRG GLEDMAGESG DNAVLLDRRM PPAEGNLPTN 1200 SGGGSRGGAA THSRGSGGAS GGYGGGGGGG SGRREPLMVH VEADPLPDAG GDKGSGGGGI 1260 GSVGLLAAAL RSVGGGSRGG RGGGGGGGFS ALTELSTVDV QEALQLFFNQ RAAQLSSLRQ 1320 QQ*

Sequence ? help Back to Top

Protein Sequence Length: 1323 aa Download sequence Send to blast

MDVVIKTEEA DQGRDDEATA RREFADHGGT AGAGLEGLPG ESLEAQRQRE EILKHGTKAV  60
AVSSNKQLTS KFRGVCWNKK NKRWQAAINS SGKYLYLGSY DTEAEAAAVF DRAAIRIRGP  120
KARLNFSYAD YVDASGNLKP DPAIDEMIQE AAAPAKPRRP RGGGGGGGGG GGRGGAAAAG  180
GDDAPTPRRG GGAGGRRRRG GGGGGAASGG NDEDEDWSEG LEEAPPARRH RGNARTGGGG  240
GGGGGGAGPQ AGFVDDGGGD DGPGGMPLDL QALLPDGGGG LGGGGLGALA GLGGNSGLGG  300
GGGGGGGGPQ RRSLMGRMLG QEEEAALSAL AEVAGAAAAA NGNGNGRGAN GNGGAAAANR  360
LATLGALDLS MGGGSSGGGG GGGLGARGTL SGISGGGLGG GGGGGGVSSG MMMGSLEELL  420
SYGRDGGGGG GLSGLGGLGG GNSGLLTSSG VKGLGGGNGG SLRGLVDGLG LGGGGLGGGG  480
GGGLGGGGHM GLLGGRGQGQ GQSGMSGGGL SGLMGSLGRG GGGGGGGGGG GFHGHGLLGS  540
LEDRSLAAAL AAAAGGGGAA AENDLRAALS HADQASAAIA RLRNRGGGGG GGGGGGGGGD  600
SSTAALLLQQ IHGGGGGGGG GGGLSGIGGG VSEDLAELLA SATGNHGGGG ALGMLRSGGG  660
NRLAPQFGRG QPSLLGGGGG GGFGGGGGGG FGGSGGRLSS LGVALRGGGG AGGGASRQLA  720
MLLQPDPDGD ADAVNDVASA LGLSFGGGGG GGNGGFNSSL FADLSGSLAS LANGIRKVPA  780
LHTGLPSLMT PAGGGGGGGG GGGGGGDGDG RGVNGLAAAA AALGGIGIKH EPMAAAEAAA  840
ATAGGGNGGG GGSGGGGGGS GYSLAALAKA LPAGCQLEAV VQSGGLAHIM GVLYTLPPGG  900
GGGGNGGGVC AAVWNGRVGR FTTLGSFANL DAARAACQAP LAVLQDAELA YAPPPPPAAV  960
AAAGAGGGGG GEGGRFKADP SGNGNHGNGS NAVLVLSAAA AERERDRDRD RDFQNHDLGF  1020
GGTAPYGGLP RPGGGGGGGG GSRLSAGATL DLAAPPLDDG LGLGGGGGGG GRWGGVSGRL  1080
SALSGFSGLS GLSSYLAGAT QPDPLPSALA GGGGGVGGGG GASVSARSGD TGSAAGGGSG  1140
GVSRTSGASS GAATAAVAAA AAQRGGGGRG GLEDMAGESG DNAVLLDRRM PPAEGNLPTN  1200
SGGGSRGGAA THSRGSGGAS GGYGGGGGGG SGRREPLMVH VEADPLPDAG GDKGSGGGGI  1260
GSVGLLAAAL RSVGGGSRGG RGGGGGGGFS ALTELSTVDV QEALQLFFNQ RAAQLSSLRQ  1320
QQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	172	RGGGGGGGGGGGR
2	1219	1230	SGGYGGGGGGGS
3	1278	1286	GGRGGGGGG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre19.g750947.t1.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3CNF1	0.0	A0A2K3CNF1_CHLRE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP3683	5	12

Link Out ? help Back to Top
Phytozome	Cre19.g750947.t1.1