PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa04g015120.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family NAC
Protein Properties Length: 175aa    MW: 20705.4 Da    PI: 5.0214
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa04g015120.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.72.9e-1691271128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     lp G+ F+Pt  e+ + +Lkk+v g+++e+ +v  ++ di++   ++Lp     +e++wy+F++r++        n++t+s  W  tg++++vl+
  Csa04g015120.1   9 LPIGVVFRPTKFEMANIFLKKRVLGQSIEAPRVPGDChDIFSRRLRELPGY--PREEHWYYFCRRRR--------NQVTSSNLWTPTGEETNVLD 93 
                     699***************************99988888***********43..4789*******965........6689999************9 PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++ +v +++ +++   ++++ge+ dW+++e rl
  Csa04g015120.1  94 PknRRLVVATRRRFTLL--EKQEGEEYDWFLDEIRL 127
                     94444458899999998..789999********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.14E-216144IPR003441NAC domain
PROSITE profilePS5100525.3589144IPR003441NAC domain
PfamPF023652.2E-910127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MEPIINRPLP IGVVFRPTKF EMANIFLKKR VLGQSIEAPR VPGDCHDIFS RRLRELPGYP  60
REEHWYYFCR RRRNQVTSSN LWTPTGEETN VLDPKNRRLV VATRRRFTLL EKQEGEEYDW  120
FLDEIRLPPT VSHSDWVLCH ILGKKIEPEI EYFPPLIESE YDESESEDEE SVDT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16072REEHWYYFCRRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa04g015120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010507043.11e-125PREDICTED: NAC domain-containing protein 14-like
TrEMBLD7LLY91e-76D7LLY9_ARALL; Uncharacterized protein
STRINGXP_010507043.11e-125(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM86041736
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56520.14e-65NAC family protein