PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa04g024180.2
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 341aa    MW: 38674.3 Da    PI: 7.3041
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa04g024180.2genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.31.6e-13258309556
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     +r+rr++kN e+A rsR+R++a++ eLe +v +L++eN++Lk+++ee +k+ 
  Csa04g024180.2 258 RRQRRMIKNGESAARSRARRQAYTVELELEVHNLTEENTKLKETVEENEKKR 309
                     79*******************************************9988875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-6254317IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.45256308IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-12257309No hitNo description
SuperFamilySSF579598.75E-9258307No hitNo description
PfamPF001707.4E-12258310IPR004827Basic-leucine zipper domain
PROSITE patternPS000360261276IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MSAVFETETS IFHMYNHDLP QTQMQTFVQE PVEEAPVARQ NSILSLTLDE IQMKSGKSFG  60
AMNMDEFLAN LWTTVEENDN NGGGGGGSVA HHGEKPAVLP RQGSLSLPVP LCKKTVDEVW  120
LEIQNGVQQH HRSSTSRQNS DEDIRRQQTL GEITLEDFLV KAGVVQEPLK TTMRMSSADF  180
DYNNPEFGVG LHCQNQNNYA DNRSVYKENR PYYSVLGDSS SCMTGNGRIS NNQYITGLDA  240
FRIKKRIIDG PPEVLMERRQ RRMIKNGESA ARSRARRQAY TVELELEVHN LTEENTKLKE  300
TVEENEKKRR QEIINRSKHV TKEKSGDKLR KIRRMASAGW *
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression during seed development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa04g024180.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ4196000.0AJ419600.1 Arabidopsis thaliana mRNA for basic leucine zipper transcription factor (atbzip67 gene).
GenBankBT0029230.0BT002923.1 Arabidopsis thaliana clone RAFL15-01-K19 (R20103) putative bZIP protein (At3g44460) mRNA, complete cds.
GenBankBT0043420.0BT004342.1 Arabidopsis thaliana clone U20103 putative bZIP protein (At3g44460) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010503099.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2
RefseqXP_019100162.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1
SwissprotQ8RYD60.0AI5L1_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLR0H9240.0R0H924_9BRAS; Uncharacterized protein
STRINGXP_010503099.10.0(Camelina sativa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.10.0bZIP family protein