PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa04g043060.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 626aa    MW: 69437.5 Da    PI: 4.8815
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa04g043060.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.14.3e-14206259356
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     e kr  r+++NRe+A  sRqRK+ ++eeLe+kvk++ +  ++L ++++    e 
  Csa04g043060.1 206 EKKRNVRLIRNRESAHLSRQRKRHYVEELEDKVKNMHSTITDLSSKMSYFMAEN 259
                     679*************************************99999987666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.1E-12203268IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.324206263IPR004827Basic-leucine zipper domain
PfamPF001702.2E-12206265IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.33E-11208265No hitNo description
Gene3DG3DSA:1.20.5.1705.6E-15208266No hitNo description
CDDcd147041.86E-17209259No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 626 aa     Download sequence    Send to blast
MAEPVLEDTP DTYLSFSSEF DSIAIAISPP PPPPPPSDNF CNSSSDQAPL LKNSISDLRF  60
YIDDDGDEDY ELNFEDSFND LYFPSENESF FVDGEMSGDF TPASESSGDF VNEHSEKDTN  120
GVLISTSSCY DRESPKDSDC SVTNLQSLSR TNQFDQKLNV EEEEEAATTS ITTKRKKENY  180
QEDTIEELRN YKYRRLDQVG FAEGDEKKRN VRLIRNRESA HLSRQRKRHY VEELEDKVKN  240
MHSTITDLSS KMSYFMAENV TLRHQVGSGM SLLPRPGMYY PVLYPWMQCP AYMVKPQGSR  300
VATLLPIPSL KPQQSVAKVK KFKKVASLSV LGLLFCLFLF GALAPFGEYK SNNVTDWVYD  360
QSRGRVLDVN GHLDVSVTSN RAHCGRDCDQ EMGRNVSATE NSGPRGNSSE PLVASLFVPR  420
NEKLVKIDGN LIIHSILASE KAMASETKNK GGKNDEATTN KGIFHALPLP DSTRTGDMSK  480
DQLKSTTANG PMFSSGMCTD VFQFDISTTS GAIIPASPPI QQSENTTDTR KGKKNRRILR  540
GGLPVSDFDL TKDHNSSSNE NFRDTQPSPS MVVSVLVDPR EGGDGMMGGT NPLFQVFIVL  600
LVDGVKYVTY SCDLSQPQVP HLVTT*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in stress responses. {ECO:0000250|UniProtKB:O22208}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa04g043060.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019100370.10.0PREDICTED: bZIP transcription factor 49-like
SwissprotQ9LXX40.0BZP49_ARATH; bZIP transcription factor 49
TrEMBLR0FMV20.0R0FMV2_9BRAS; Uncharacterized protein
STRINGCagra.0925s0079.1.p0.0(Capsella grandiflora)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16991911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56660.10.0basic region/leucine zipper motif protein 49
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]