PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa06g031380.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 614aa    MW: 67912 Da    PI: 5.083
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa06g031380.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.75.9e-14188241356
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     e kr  r+++NRe+A  sRqRK+ ++eeLe+kvk++ +  ++L ++++    e 
  Csa06g031380.1 188 EKKRNVRLIRNRESAHLSRQRKRHYVEELEDKVKNMHSTITDLNSKMSYFMAEN 241
                     679***********************************9999999987666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-11185250IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.358188245IPR004827Basic-leucine zipper domain
PfamPF001703.5E-12188247IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.3E-15190248No hitNo description
SuperFamilySSF579593.09E-11190247No hitNo description
CDDcd147045.65E-18191241No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    Send to blast
MAEPVLEDTY LSFSSEFDSI AIAISPPPCD NFCNSSSDQA PLLKNSISDL RFFIDDDGDG  60
DYELNFDDSV DDLYFPSENE SFFVDGEMSG DFTPASETSG DSVNEYAEKD TNGVLISTSS  120
CYDRESPKDS DCSVTIQSLS RTNHFDQKLK VEEDKSITTK GQKEIDQEEL RNYKYRILDQ  180
DGCAEGDEKK RNVRLIRNRE SAHLSRQRKR HYVEELEDKV KNMHSTITDL NSKMSYFMAE  240
NVTLRHQVGS GMSLLPRPGM YYPVLSPWMQ CPAYMVQSQG SQVATLFPIP RLKPKQSVAK  300
AKKFKKVASL SVLGLLFCLS LFGSLAPFGE YKSNYVTDWV YDQSRGRVLD LNLHLDNSGP  360
RGNSSEPLVA SLFVPRNEKL VKIDGNSIIH SILASEKAVA SETKNEGGKS DEATTNKGIF  420
HALPLPDSTR TGDMSKHVYS EKRKALSSSG SVDASKDQLK STTANAKMQQ WFREGVAGPM  480
FSSGMCTDVF QFDVSTTSGA IIPASPPIQQ SENTIDTHNG KKNRRILRGG LPVSDVNLTK  540
DYNSSNNENF RDTKPSPSMV VSVLVDPREG GNEMMGGTNP LSQVFIVLLV DGVKYVTYSC  600
VLPQPEVPHL VTT*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in stress responses. {ECO:0000250|UniProtKB:O22208}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa06g031380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019084904.10.0PREDICTED: LOW QUALITY PROTEIN: bZIP transcription factor 49-like
SwissprotQ9LXX40.0BZP49_ARATH; bZIP transcription factor 49
TrEMBLR0FMV20.0R0FMV2_9BRAS; Uncharacterized protein
STRINGCagra.0925s0079.1.p0.0(Capsella grandiflora)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16991911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56660.10.0basic region/leucine zipper motif protein 49
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]