PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Csa06g046820.1

Organism

Camelina sativa

Taxonomic ID

90675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina

Family

bZIP

Protein Properties

Length: 725aa MW: 78396.8 Da PI: 5.9448

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Csa06g046820.1	genome	CSGP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.5	2.8e-13	230	291	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ k+ r+++NRe+A+ sRqRKk ++eeLeekv +L + ++L +++ e a+l+++ Csa06g046820.1 230 EEDEKKKARLMRNRESAQLSRQRKKHYVEELEEKVRNLHSTITDLNGKMSYVMAENATLRQQ 291 678899**************************************999999999999988887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-15	230	294	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.5E-11	231	292	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.484	232	292	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.6E-16	234	293	No hit	No description
SuperFamily	SSF57959	1.48E-11	234	292	No hit	No description
CDD	cd14704	2.97E-21	235	286	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence Send to blast
MAEPITEQPP PPAPDPNSTH PPPSDFDSIS IPPFDDHFGS DQTPIGELMS DLGFPDGEFE 60 LTFDGMDDLY FPAENESFLI PVNASTQEHF GDFTPDSEAS GISGGSLLLP TKDDAVTTSG 120 CCNRESPRDD SDDRCSGADR SLDLPTPLSS QGSGNCGSDV SEATNESSPK SGNVVVDQKV 180 KVEEAVATTT TTSIITKRKK EIEEDLSDES RNSKYRRSGE DADASAVTGE EDEKKKARLM 240 RNRESAQLSR QRKKHYVEEL EEKVRNLHST ITDLNGKMSY VMAENATLRQ QLGANGMCPP 300 HHPPPPMGMY PPMAPMPYPW MPCPPYIVKQ QGSQVPLIPI PRLKPQNPLG TSKAKKSESK 360 KSEAKTKKVA SISFLGLLFC LFLFGALAPI VNVNYGGISG AFYGNYRSNY ITDQIYSQHR 420 DRVLDASRSG AGTGVSNSNG IHCGRDSDQG TRKNISATES SVPPGNGSEP LVASLFVPRN 480 DKLVKIDGNL IINSILASEK AVASRKASES NERNADLVIP KDYSPALPLP DVGRTEEMAK 540 HLYRSKTEKQ KALSSGSADT LKDQFKTKAA NGEMQQWFRE GVAGPMFSSG MCTEVFQFDV 600 SSTSGAIIPA TNVSAEHVKN TTDTHKRKNR RILRGLPIPL PGSDFNLTKE HQRNSSSKEI 660 KPASSVVVSV LVDPREGGDG DIEGMIGGPK SLSRVFVVVL LDSAKYVTYS CVLPRSGAPH 720 LVTT*

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence Send to blast

MAEPITEQPP PPAPDPNSTH PPPSDFDSIS IPPFDDHFGS DQTPIGELMS DLGFPDGEFE  60
LTFDGMDDLY FPAENESFLI PVNASTQEHF GDFTPDSEAS GISGGSLLLP TKDDAVTTSG  120
CCNRESPRDD SDDRCSGADR SLDLPTPLSS QGSGNCGSDV SEATNESSPK SGNVVVDQKV  180
KVEEAVATTT TTSIITKRKK EIEEDLSDES RNSKYRRSGE DADASAVTGE EDEKKKARLM  240
RNRESAQLSR QRKKHYVEEL EEKVRNLHST ITDLNGKMSY VMAENATLRQ QLGANGMCPP  300
HHPPPPMGMY PPMAPMPYPW MPCPPYIVKQ QGSQVPLIPI PRLKPQNPLG TSKAKKSESK  360
KSEAKTKKVA SISFLGLLFC LFLFGALAPI VNVNYGGISG AFYGNYRSNY ITDQIYSQHR  420
DRVLDASRSG AGTGVSNSNG IHCGRDSDQG TRKNISATES SVPPGNGSEP LVASLFVPRN  480
DKLVKIDGNL IINSILASEK AVASRKASES NERNADLVIP KDYSPALPLP DVGRTEEMAK  540
HLYRSKTEKQ KALSSGSADT LKDQFKTKAA NGEMQQWFRE GVAGPMFSSG MCTEVFQFDV  600
SSTSGAIIPA TNVSAEHVKN TTDTHKRKNR RILRGLPIPL PGSDFNLTKE HQRNSSSKEI  660
KPASSVVVSV LVDPREGGDG DIEGMIGGPK SLSRVFVVVL LDSAKYVTYS CVLPRSGAPH  720
LVTT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269\|PubMed:17662035, ECO:0000269\|PubMed:20876872}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Csa06g046820.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AY136295	0.0	AY136295.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds.
GenBank	BT000408	0.0	BT000408.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010517576.1	0.0	PREDICTED: bZIP transcription factor 17-like
Swissprot	O22208	0.0	BZP17_ARATH; bZIP transcription factor 17
TrEMBL	A0A178VQX7	0.0	A0A178VQX7_ARATH; BZIP17
STRING	XP_010517576.1	0.0	(Camelina sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM8881	27	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	0.0	bZIP family protein

Publications ? help Back to Top
Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792] Sagor GH, et al. The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. Front Plant Sci, 2015. 6: p. 687 [PMID:26442007] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Kim JS,Yamaguchi-Shinozaki K,Shinozaki K ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation. Plant Physiol., 2018. 176(3): p. 2221-2230 [PMID:29367234] Cifuentes-Esquivel N, et al. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem., 2018. 119(8): p. 6857-6868 [PMID:29693271] Guan P, et al. SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance. Plant Physiol., 2018. 178(3): p. 1390-1405 [PMID:30287478]