PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa07g051420.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 451aa    MW: 48426.7 Da    PI: 9.2672
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa07g051420.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.71.9e-11375433563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr +r   NR++A rs +RK  +++eLe kv++L++e ++L  +l +l+  +  l++++
  Csa07g051420.1 375 KRVKRILANRVSAARSKERKTRYMAELEHKVQTLQTEATTLSAQLTHLQRDSMGLTNQN 433
                     899*********************************************99888777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-19371435IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749373436IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.34E-11375431No hitNo description
PfamPF001701.3E-9375432IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.3E-12375432No hitNo description
CDDcd147033.79E-21376425No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MGDTDTNMMQ RVNSSSGSGT SSSSIPKQVK PNLLHLNPAL LRSQHHHFRQ PFSGPPPLPI  60
PPVSPYSQIP ATLQLKHSRS LSQPSSYFSF DSFSPFIPSP PPVSVSVEEN TGAGFTPSLP  120
PSPFTMCHSS SSRNAGDGEN LPPRKSHRRA NSDVTFGFSS TVAPQNQKSP PLVPSRSLER  180
SISGGEVSDR SNLVKEEPRE GFVKARKSEG EAAAAMDDVF TAYMNLDNID VLNSFGGENG  240
NVEEMESSRG SGTKKTNGGS SSDSEGESSA SGNVKAAVSS SSSGVKRRAG GDIEPTTRHF  300
RSVSMDSSLM GKLSFGDESS LKLPPSSAKV SPTNSGEGNS SAYSVEFGNG EFTAAEMKKI  360
AADEKLAEIV MADPKRVKRI LANRVSAARS KERKTRYMAE LEHKVQTLQT EATTLSAQLT  420
HLQRDSMGLT NQNSELKFRL QAMEQQAQLR D
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa07g051420.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010416864.10.0PREDICTED: uncharacterized protein LOC104702667
TrEMBLR0HSG30.0R0HSG3_9BRAS; Uncharacterized protein
STRINGXP_010416864.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156251417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21230.20.0bZIP family protein