PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa07g061590.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family NAC
Protein Properties Length: 99aa    MW: 11548.3 Da    PI: 5.1779
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa07g061590.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.86.2e-08217878128
             NAM  78 tksgyWkatgkdkevlsk.kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                      + gyW+    d  + s  +ge++g kk++ fy        r+ +  k +W+++eyrl
  Csa07g061590.1  21 CDGGYWRIMHPDVMINSMpSGETIGFKKVFKFYetekqrYVREGEEIKVTWFIDEYRL 78 
                     468*********9999988999***********555432245666679********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.843194IPR003441NAC domain
SuperFamilySSF1019413.66E-14691IPR003441NAC domain
PfamPF023651.6E-41878IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MFLNFGTCIF ANQTCGDTEK CDGGYWRIMH PDVMINSMPS GETIGFKKVF KFYETEKQRY  60
VREGEEIKVT WFIDEYRLVE KEMQNKVLSV ISIITKDN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa07g061590.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010419423.24e-66PREDICTED: uncharacterized protein LOC104705138
TrEMBLR0GIC34e-37R0GIC3_9BRAS; Uncharacterized protein
STRINGXP_010513366.14e-56(Camelina sativa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G60300.13e-35NAC family protein