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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa08g036280.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
GRAS |
| Protein Properties |
Length: 484aa MW: 53734.9 Da PI: 5.0896 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa08g036280.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 332.6 | 7.2e-102 | 104 | 476 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
lv+lL+++Aea + +++ l++ +Larl++l+sp + ++m+Rl+a+ft++L++ l r +++ + + ++ ++++++++a+++++++sP+++
Csa08g036280.1 104 LVHLLVAAAEASTGANKSpeLTRVILARLKDLVSPGDrTNMERLVAHFTNGLSKLLER--DNVLRPNNHCND-VYDQADVISAFQMLQNMSPYVN 195
689********998777666***************9989*******************..777765544444.4679****************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlva 183
f++lt+ qaIle+v+ e+r+Hi+D+di +G+QWp+L+qaL sR+ ++ +lRiT+++++++g s +++e g+rL+ fAe++g pf+f+
Csa08g036280.1 196 FGYLTTTQAILESVKYERRIHIVDYDIAEGIQWPSLMQALLSRNtgTSAQHLRITALSRATNGkkSVAAVQEAGRRLTAFAESIGQPFSFHH-CK 289
********************************************655577*********999999999***********************9.67 PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpr 277
+ +++++++L++ +gEa+++n++l+l r+ +++ ++ ++L k+l+Pk+v++v++e+ + +++ Fl rf++ l+ +sa+fdslea+l+
Csa08g036280.1 290 LDNDAFNTSSLKLVRGEAVVINCMLHLPRFSHKTPNSVI---SFLLEAKTLNPKLVTLVHEEVGLmGNQCFLYRFMDLLHQFSAIFDSLEASLSI 381
799***************************977777666...9*********************99***************************** PP
GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvS 371
++ r +v+r+++g+++ n+++ +a+ + e++++W ++le+ GF+++++s + +qaklll+ ++ dgy+vee ++ lvlgWk+r+Lvs+S
Csa08g036280.1 382 TNPVRGFVDRVFIGPWVANWLTRITAD-DSEVESFASWPQWLETNGFEAMEVSFANRCQAKLLLSLFN-DGYSVEELgQNGLVLGWKSRRLVSAS 474
**************************9.9999************************************.******98789999************ PP
GRAS 372 aW 373
+W
Csa08g036280.1 475 FW 476
** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 484 aa
Download sequence Send
to blast |
MTMNYPYEDF LDLFFSTKTN TPVTAASTSS CGYSLNDLDV DWGCDFRDVI ESIMGDEGVI 60 METESAPMLH SQEGICNSAS TGLSVTDGVS VEEPKLDESK GFRLVHLLVA AAEASTGANK 120 SPELTRVILA RLKDLVSPGD RTNMERLVAH FTNGLSKLLE RDNVLRPNNH CNDVYDQADV 180 ISAFQMLQNM SPYVNFGYLT TTQAILESVK YERRIHIVDY DIAEGIQWPS LMQALLSRNT 240 GTSAQHLRIT ALSRATNGKK SVAAVQEAGR RLTAFAESIG QPFSFHHCKL DNDAFNTSSL 300 KLVRGEAVVI NCMLHLPRFS HKTPNSVISF LLEAKTLNPK LVTLVHEEVG LMGNQCFLYR 360 FMDLLHQFSA IFDSLEASLS ITNPVRGFVD RVFIGPWVAN WLTRITADDS EVESFASWPQ 420 WLETNGFEAM EVSFANRCQA KLLLSLFNDG YSVEELGQNG LVLGWKSRRL VSASFWASHE 480 SNL*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |