PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa08g056220.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 140aa    MW: 17017.8 Da    PI: 7.2308
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa08g056220.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.11.7e-073781448
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
                     kr rr+++NRe+ rrsR R ++++e L+  v++  a N+ L ++
  Csa08g056220.1 37 EKRLRRRASNRESVRRSRMRERKKMEWLKMQVAQVMASNQFLSNK 81
                    59*************************************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-43498IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.1E-83591No hitNo description
PfamPF077162.8E-103585IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-63686No hitNo description
PROSITE profilePS502179.2433699IPR004827Basic-leucine zipper domain
CDDcd147026.37E-123987No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MFLQNPHDED FHVHDHHQVD NHEQHHHHQP SVVVDQEKRL RRRASNRESV RRSRMRERKK  60
MEWLKMQVAQ VMASNQFLSN KYISLLEYNN QIWQENSQLK ETVSSLFQEY TIFHGEHDYD  120
TPRFINGFDL NQQYPHQPT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa08g056220.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010491438.12e-76PREDICTED: bZIP transcription factor 2
TrEMBLR0FLV43e-47R0FLV4_9BRAS; Uncharacterized protein
STRINGXP_010491438.18e-76(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17031811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08141.14e-24basic leucine-zipper 75