PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa08g057280.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 151aa    MW: 17098.7 Da    PI: 10.3447
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa08g057280.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.55.7e-0850108563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     ++ +r + NR++A +sR +K++++  L + + eL+    +L+ +++   +e ++l++e+
  Csa08g057280.1  50 QKLKRIIANRISAHKSRWKKLQYVNTLVKGSMELQIAVNMLRAKINIAIEEKQYLENEK 108
                     578999****************************999889****999888888888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-446110IPR004827Basic-leucine zipper domain
PfamPF001701.8E-650108IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.47E-850106No hitNo description
CDDcd147035.05E-1151102No hitNo description
Gene3DG3DSA:1.20.5.1708.0E-851115No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MSFHVVATSS GTPQSNNQAG EKKSVLVQYE VEPGFTIHIH NNIDPATDPQ KLKRIIANRI  60
SAHKSRWKKL QYVNTLVKGS MELQIAVNML RAKINIAIEE KQYLENEKKQ LKETISARLQ  120
DYLNNYGITN MYKVEIQRLK KSMAPPTSST *
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa08g057280.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010423246.11e-108PREDICTED: basic leucine zipper 34-like
TrEMBLD7LZY25e-58D7LZY2_ARALL; DNA binding protein
STRINGXP_010423245.11e-105(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144181821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07160.12e-61bZIP family protein