PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa09g034290.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 400aa    MW: 45843 Da    PI: 8.455
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa09g034290.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-14317368556
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     +r+rr++kNRe+A rsR+R++a++ eLe +v +L++eN++Lk+++ee +k+ 
  Csa09g034290.1 317 RRQRRMIKNRESAARSRARRQAYTVELELEVHNLTEENTKLKETVEENEKKR 368
                     79*******************************************9988875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-8313376IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.128315367IPR004827Basic-leucine zipper domain
PfamPF001705.0E-13317369IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-10317366No hitNo description
Gene3DG3DSA:1.20.5.1709.1E-14317368No hitNo description
PROSITE patternPS000360320335IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MKINITIACM HIAYIYLHHC RLRLFFTLKV SVSTDTILNY LPFFFFFLLT TFFFQGVQTM  60
SAVFETETSI FHMYNHDLPQ TQMQTFVQEP VEEAPVARQN SILSLTLDEI QMKSGKSFGA  120
MNMDEFLANL WTTVEENDNN GGGGGGSVAH HGEKPAVLPR QGSLSLPVPL CKKTVDEVWL  180
EIQNGVQQHH RSSTSRQNSD EDIRRQQTLG EITLEDFLVK AGVVQEPLKT TMRMSSADFD  240
YNNPEFGVGL HCQNQNNYAD NRSVYKENRP YYSVLGDSSS CMTGNGRISN NQYITGLDAF  300
RIKKRIIDGP PEVLMERRQR RMIKNRESAA RSRARRQAYT VELELEVHNL TEENTKLKET  360
VEENEKKRRQ EIINRSKHVT KEKSGDKLRK IRRMASAGW*
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression during seed development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa09g034290.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019085979.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2
SwissprotQ8RYD60.0AI5L1_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLR0H9240.0R0H924_9BRAS; Uncharacterized protein
STRINGXP_010425862.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM116522230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.10.0bZIP family protein