PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa09g069250.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 654aa    MW: 70165.3 Da    PI: 9.5824
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa09g069250.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.86.4e-15583626548
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     +r++r++kNRe+A rsR+RK+a++ eLe kv  Le+eN++L+k+
  Csa09g069250.1 583 RRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQ 626
                     79****************************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-6388419No hitNo description
SMARTSM003380.04391453IPR004827Basic-leucine zipper domain
CDDcd147071.56E-11395421No hitNo description
PROSITE patternPS000360398413IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-13576626No hitNo description
SMARTSM003389.0E-13579651IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.45581626IPR004827Basic-leucine zipper domain
CDDcd147077.16E-23583628No hitNo description
PfamPF001703.1E-12583626IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.13E-10583628No hitNo description
PROSITE patternPS000360586601IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    Send to blast
MDSQRGIVEE AKSQSLNRQG SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ  60
PSSIALNGAA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI QQNKNGGGNA HERRDKQPTL  120
GEMTLEDLLL KAGVVTETIP GSNHDGPGVP VGGGGSAGSA PINATASNVY ALSGFRYASD  180
GVXSLYSLTL DEVQNHLGSS GKALGSMNLD ELLKSVCSVE ANQPSSIALN GAAAAQEGLS  240
RQGSLTLPRD LSKKTVDEVW KDIQQNKNGG GNAHERRDKQ PTLGEMTLED LLLKAGVVTE  300
TIPGSNHDGP GVPVGGGGSA GSGAGLGQNI PQVGPWVQYH QLPSMPQPQT FMPYPVSDMQ  360
AMVSQSSLMG GLSDTQTPGR KRVASGEVVE KTVERRQKRM IKNRESAARS RARKQVRNNF  420
FLSSHAHFLL LFVFHXRDLS KKTVDEVWKD IQQNKNGGGN AHERRDKQPT LGEMTLEDLL  480
LKAGVVTETI PGSNHDGPGV PVGGGGSAGS GAGLGQNIPQ VGPWVQYHQL PSMPQPQTFM  540
PYPVSDMQAM VSQSSLMGGL SDTQTPGRKR VASGEVVEKT VERRQKRMIK NRESAARSRA  600
RKQAYTHELE IKVSRLEEEN ERLRKQKEVE RILPSAPPPD PKRQLRRTSS APF*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa09g069250.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0171620.0AB017162.1 Arabidopsis thaliana mRNA for ABA-responsive element binding protein 3 (AREB3), complete cds.
GenBankAY0624480.0AY062448.1 Arabidopsis thaliana promoter-binding factor-like protein (At3g56850; T8M16_180) mRNA, complete cds.
GenBankAY0816700.0AY081670.1 Arabidopsis thaliana promoter-binding factor-like protein (At3g56850) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010427524.11e-147PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3
RefseqXP_010427525.11e-147PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X5
RefseqXP_019084907.11e-147PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_019084908.11e-147PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
RefseqXP_019084909.11e-147PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X4
SwissprotQ9LES31e-139AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A178VIK41e-137A0A178VIK4_ARATH; DPBF3
TrEMBLR0FMQ71e-137R0FMQ7_9BRAS; Uncharacterized protein
STRINGXP_010427523.11e-146(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-140ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]