PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa09g085610.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 530aa    MW: 57543.6 Da    PI: 7.9729
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa09g085610.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.52.1e-11379437563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr +r   NR++A rs +RK  +++eLe kv++L++e ++L  +l +l+  +  l++++
  Csa09g085610.1 379 KRVKRILANRVSAARSKERKTRYMAELEHKVQTLQTEATTLSAQLTHLQRDSMGLTNQN 437
                     899*********************************************99888777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-19375439IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749377440IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.01E-11379435No hitNo description
PfamPF001701.3E-9379436IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.9E-12379436No hitNo description
CDDcd147031.94E-20380429No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MMDGAGVGGD TDTNMVQRVN SSSGSGTSSS SSIPKQRKPN LLHLNPALLR PQQHHHFRQP  60
FSGPPPLPIP PVSPYSQIPA TLQLKHSRSL SQPSSYFSFD SFPPFMNPSP PPVSVSVEEI  120
TGAGFTPSQL PPSPFTVCHS SSSRNVGDGE NLPPRKSHRR ANSDVTFGFS STVAQNQKSP  180
PLVPSRSLER SISGGDVSDR SNLVKEEPRE GFFKAREAAA MDDVFTAYMN LDNIDVLNSF  240
GGEDGNNGNE NVEEMESSGT KKTSQGGSSS DSEGESSASG NVRAAVSSSS GVKRRAGGDI  300
ETTTRHNRSV SMDSSLMEKL SFADEKLPPS SAKVSPTNSA EGNSSAYSVE FGNGEFTAAE  360
MKKIAADEKL AEIVMADPKR VKRILANRVS AARSKERKTR YMAELEHKVQ TLQTEATTLS  420
AQLTHLQRDS MGLTNQNSEL KFRLQAMEQQ AQLRDALSEK LTEEVQRLKR VIGELNRRQS  480
GSSESNISRT SLNPEMFQQL SISQLQHQQM HHHSNQNNST MNAKHTSNE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa09g085610.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010429020.10.0PREDICTED: uncharacterized protein LOC104713566
TrEMBLD7LL150.0D7LL15_ARALL; Uncharacterized protein
STRINGXP_010429020.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156251417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21230.10.0bZIP family protein