PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa11g072090.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 353aa    MW: 39484.9 Da    PI: 10.565
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa11g072090.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10274325354
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                     ++k+ +rk+kNRe+A rsR+RK+a++ eLe +  +L+++ ++L ke   ++k
  Csa11g072090.1 274 ADKKLKRKIKNRESAARSRARKQAKTMELELELGNLKKKYQELLKEQVDMRK 325
                     689*************************************988877555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-10271324No hitNo description
SMARTSM003384.8E-5272338IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.691274325IPR004827Basic-leucine zipper domain
PfamPF001705.5E-8274326IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-8276325No hitNo description
CDDcd147071.07E-17276330No hitNo description
PROSITE patternPS000360279294IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MDSYWRLKNL VNDFPVSRQG SIYSWTVDQF QTSLGKNCGS MNMHELVKNI SSAEETQEGL  60
KRQGPISLPR TLSQKTVAEV WKFTQEDNTT NNGVTKVPDH LQRQQTLGDI TLEEFLSRSG  120
AKVNNRNTGL GVQFQPKAMV SDFTNNIVPR SHDSNMHQNV NGSMSTYQPQ QCIMSKPNGY  180
SYGGQQIRIS NGVTGFIDQT VQAEKRSLVP RVATNPSGAI ACSSVNPFPI LNKMQKIDGT  240
SSLLSPSPNI FSGSTSTTRG MKIDNAIAAD NKIADKKLKR KIKNRESAAR SRARKQAKTM  300
ELELELGNLK KKYQELLKEQ VDMRKMQTEP GMIQQLQGRP ERRLRRTKSD IM*
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa11g072090.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0082642e-69AB008264.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2.
GenBankAJ4195992e-69AJ419599.1 Arabidopsis thaliana mRNA for basic leucine zipper transcription factor (atbzip15 gene).
GenBankCP0026882e-69CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010442101.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 8
SwissprotQ9FMM71e-169AI5L8_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 8
TrEMBLR0EYV11e-167R0EYV1_9BRAS; Uncharacterized protein
STRINGXP_010442101.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156311417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42910.11e-135bZIP family protein