PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa13g010160.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 140aa    MW: 16802.6 Da    PI: 7.1909
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa13g010160.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.41.5e-083781448
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
                     kr rr+++NRe+ rrsR R ++++e L+  v+++ + N+ L ++
  Csa13g010160.1 37 EKRLRRRASNRESVRRSRMRERKKMEWLKMQVAQIMGSNQFLSNK 81
                    59*************************************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-53498IPR004827Basic-leucine zipper domain
PfamPF077164.4E-83585IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-73587No hitNo description
SuperFamilySSF579599.64E-73685No hitNo description
PROSITE profilePS502179.2323699IPR004827Basic-leucine zipper domain
CDDcd147022.69E-113987No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MFLQNPHDED FHVHDHHQVD NHEQHHHHQP SVVVDQEKRL RRRASNRESV RRSRMRERKK  60
MEWLKMQVAQ IMGSNQFLSN KYISLLEYSN QILQENSQLK ETLSSLFQEY TIFNGEHDDG  120
TPRFINGFDL NQQYPHQPT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa13g010160.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010491438.19e-74PREDICTED: bZIP transcription factor 2
TrEMBLR0FLV47e-48R0FLV4_9BRAS; Uncharacterized protein
STRINGXP_010491438.13e-73(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17031811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08141.11e-23basic leucine-zipper 75