PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa13g025120.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family EIL
Protein Properties Length: 382aa    MW: 43432.6 Da    PI: 6.7264
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa13g025120.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3133.23.9e-41491721123
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa.tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                     eel+k+ w+d+++lk+l+e  k+    k+    +++  ++  +q+++++m +aQDgiLkYM k++e ++aqGfvYgi+ e+gk+v+g+sd+Lr+W
  Csa13g025120.1  49 EELEKKIWRDKQRLKQLREVAKSGGLGKKLLmNQQHHGDDLLQQSSKRAMYKAQDGILKYMSKTVERYKAQGFVYGIVLENGKTVTGSSDNLREW 143
                     8******************99987666666413444445999***************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3  95 Wkekvefdrngpaaiskyqaknlilsges 123
                     Wk+kv+fdrng aai+k+q + ++++ ++
  Csa13g025120.1 144 WKDKVRFDRNGLAAIMKHQRDINLSDVKN 172
                     ******************99887766544 PP
2EIN324.54.5e-08184268270354
                     XXXXXXXXXXXXXXXX.....XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
            EIN3 270 qspkvtlsceqkedve.....gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354
                     ++++v + +++++dv+     g   s+  + q  +  ++f++v krk + +   ++  +  + tc++s +++s+++++f+d+n ++++++
  Csa13g025120.1 184 GDRDVLFPESANYDVDqgiggG---SHRFNQQYPEVDNNFNCVYKRKFEGDLGISMLPT--ILTCENSLCPYSQPHMGFHDRNLRENHQM 268
                     5678889999999999886433...33345666667779********877777777766..79*************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.2E-4549177No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MYNNNNNRGL FRGLVCSPVT PFTEGDVCSD RHNAVCDDDA CSDEEMEIEE LEKKIWRDKQ  60
RLKQLREVAK SGGLGKKLLM NQQHHGDDLL QQSSKRAMYK AQDGILKYMS KTVERYKAQG  120
FVYGIVLENG KTVTGSSDNL REWWKDKVRF DRNGLAAIMK HQRDINLSDV KNNNACNFPV  180
PGTGDRDVLF PESANYDVDQ GIGGGSHRFN QQYPEVDNNF NCVYKRKFEG DLGISMLPTI  240
LTCENSLCPY SQPHMGFHDR NLRENHQMTC PYKVTSFYQP TKTYGMSGSM VPCPDYNRMQ  300
QHQVQRIQDQ YNPSNNLYRP KVEQRGGNSD DLVGDMSPSP LMLNHNPGLA LPSDFNGHAE  360
TVGMVNKLQN QEQELPTSWL Q*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa13g025120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010454435.11e-154PREDICTED: ETHYLENE INSENSITIVE 3-like 2 protein
SwissprotO231157e-93EIL2_ARATH; ETHYLENE INSENSITIVE 3-like 2 protein
TrEMBLA0A078F7T11e-122A0A078F7T1_BRANA; BnaA02g05250D protein
TrEMBLM4DUF31e-122M4DUF3_BRARP; Uncharacterized protein
STRINGXP_010454435.11e-154(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2141635
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21120.13e-95ETHYLENE-INSENSITIVE3-like 2