PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa14g017660.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family G2-like
Protein Properties Length: 164aa    MW: 18584.1 Da    PI: 7.1277
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa14g017660.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.91.6e-112446224
         G2-like  2 prlrWtpeLHerFveaveqLGGs 24
                    prlrWtpeLH++Fv+av+ LGG+
  Csa14g017660.1 24 PRLRWTPELHRSFVHAVDLLGGQ 46
                    8*********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.8E-102069IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MGRCGRSSDG GIGGVRPYVR SPVPRLRWTP ELHRSFVHAV DLLGGQYSQC IGDPESVFLG  60
NQKRVLHHLQ EEEEDKTMKK IIFMTTCLYT QGMIVFWVFT LLTLENRREQ TSVTDNDDDD  120
FLTIMNMERT KTFAGNGESI KFQSHHFLEG RLGAWGLGLG ARY*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa14g017660.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ6304861e-120AJ630486.1 Arabidopsis thaliana mRNA for hypothetical protein, clone At1g14600.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010458964.11e-52PREDICTED: putative Myb family transcription factor At1g14600 isoform X1
RefseqXP_010458965.19e-53PREDICTED: putative Myb family transcription factor At1g14600 isoform X2
SwissprotQ700D93e-49MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLD7KBM49e-49D7KBM4_ARALL; DNA binding protein
STRINGXP_010458964.14e-52(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46941852
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-50G2-like family protein