PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa20g011550.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 170aa    MW: 20358.3 Da    PI: 6.6983
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa20g011550.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39e-1067111448
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      kr rr+++NRe+ArrsR R ++++e+L+  +++L a N+ L ++
  Csa20g011550.1  67 EKRLRRMASNRESARRSRMRERKKMERLTMQAAQLMASNQFLSDK 111
                     59*************************************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-664128IPR004827Basic-leucine zipper domain
PfamPF077162.9E-865115IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-965117No hitNo description
PROSITE profilePS502179.69166129IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.5E-868119No hitNo description
CDDcd147021.65E-1569117No hitNo description
PROSITE patternPS0003607186IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MEADEDQQYP SHCFNLYEGN PSRNNDFNSM FLQNPHDEDF HVHDHHQVDN HDQHHHHHQP  60
SVVVDQEKRL RRMASNRESA RRSRMRERKK MERLTMQAAQ LMASNQFLSD KYISLLEYNH  120
QISQENSQLK KTVSSLFQEY TIFHGEHHDD TPRFIHGFDL NQQYLHQPT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa20g011550.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010491438.11e-123PREDICTED: bZIP transcription factor 2
TrEMBLQ9LEZ22e-47Q9LEZ2_ARATH; Uncharacterized protein T22D6_80
TrEMBLR0FLV44e-50R0FLV4_9BRAS; Uncharacterized protein
STRINGXP_010491438.11e-122(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17031811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08141.18e-21basic leucine-zipper 75