PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Csa20g066710.1

Organism

Camelina sativa

Taxonomic ID

90675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina

Family

bZIP

Protein Properties

Length: 225aa MW: 25536.2 Da PI: 10.6452

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Csa20g066710.1	genome	CSGP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.8	3.6e-11	147	194	3	50
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++k+ +rk+kNRe+A rsR+RK+a++ eLe + ++L+++ ++L e Csa20g066710.1 147 DDKKLKRKIKNRESAARSRARKQAKTMELELELENLKKKYQELLREQV 194 689************************************998765544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.7E-11	142	198	No hit	No description
SMART	SM00338	6.7E-5	145	202	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.3	147	198	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.4E-8	147	198	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.5E-9	149	198	No hit	No description
PROSITE pattern	PS00036	0	152	167	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence Send to blast
MDSYWRLKNL VYDVPVSRQG SIYSWTVDQF QTSLGKNCGS MNMDELVKNI SSAEETQEGL 60 KRQGSIRQHQ HQTVQAEKRS LIPRVATNPS GAIACSSVNP FPILNKMQNI DGTSSLLSPS 120 PNIFSGSTST TRGRKIDNAI APENKIDDKK LKRKIKNRES AARSRARKQA KTMELELELE 180 NLKKKYQELL REQVDMRKMQ TEPGMIQLQG RPERKLRRTK SDIM*

Functional Description ? help Back to Top
Source	Description
UniProt	Could participate in abscisic acid-regulated gene expression. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Csa20g066710.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010494253.1	1e-166	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 8
Swissprot	Q9FMM7	1e-62	AI5L8_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 8
TrEMBL	R0EYV1	2e-70	R0EYV1_9BRAS; Uncharacterized protein
STRING	XP_010494253.1	1e-165	(Camelina sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM15631	14	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42910.1	2e-34	bZIP family protein