PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cucsa.283860.2
Organism
Cucumis sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family G2-like
Protein Properties Length: 253aa    MW: 28130.6 Da    PI: 6.7846
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cucsa.283860.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.45.5e-12208233126
         G2-like   1 kprlrWtpeLHerFveaveqLGGsek 26 
                     k+r++W++eLH+rFv+a++qLGG++ 
  Cucsa.283860.2 208 KQRRCWSSELHRRFVHALQQLGGPHG 233
                     79*********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-9205236IPR009057Homeodomain-like
TIGRFAMsTIGR015577.5E-8208233IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDFVHTFLDI RVGMDLSNYA DALDRERQKI QVFQRELPLC LELVTRAIDS CRQQLSGVST  60
ESSEHTSSDR PVLEEFIPIN KPCVNSHFEI EEDEQSKPGK IELGRSDWLK SAQLWNQSPD  120
PPLTEDVAKE VVEVKNNGGG GAFQPFEKTT PLKTESAVVV GRTAGSSFPE ATTISIPETT  180
TSSTAGTASK CGGGTAKRED KESQTQRKQR RCWSSELHRR FVHALQQLGG PHGTKKSKIF  240
LQFLSYFLNK LF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818961e-106LN681896.1 Cucumis melo genomic scaffold, anchoredscaffold00016.
GenBankLN7132641e-106LN713264.1 Cucumis melo genomic chromosome, chr_10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004135112.11e-172PREDICTED: uncharacterized protein LOC101203539
TrEMBLA0A0A0KWD51e-171A0A0A0KWD5_CUCSA; Uncharacterized protein
STRINGXP_004135112.11e-172(Cucumis sativus)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.17e-44G2-like family protein