PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cucsa.337130.2
Organism
Cucumis sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family G2-like
Protein Properties Length: 203aa    MW: 22437.6 Da    PI: 8.0487
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cucsa.337130.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.25.8e-1637652755
         G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                    AtPk +l++m+v+gLt++hvkSHLQkYRl
  Cucsa.337130.2 37 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 65
                    9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.4E-63665IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-153666IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-113766IPR006447Myb domain, plants
PfamPF143792.3E-2297142IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MKFVVGVNVC TILLQIIDLM ILLMNWQAFY NVSCLGATPK GVLRVMGVPG LTIYHVKSHL  60
QKYRLAKYLP ESPADGSKDE KRSSESLSGT DSSSGLQINE ALRMQMEVQK RLQEQLEVQR  120
QLQMRIEAQA KYLQKIIEEQ QKLGGESKDS EVVPSAEDNK QKTCQSESYG DVSAGPSSPR  180
KKQRVDHGST DDSAPSPSIN LP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818411e-121LN681841.1 Cucumis melo genomic scaffold, anchoredscaffold00011.
GenBankLN7132581e-121LN713258.1 Cucumis melo genomic chromosome, chr_4.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004136602.11e-116PREDICTED: protein PHR1-LIKE 1 isoform X1
RefseqXP_008443160.11e-116PREDICTED: protein PHR1-LIKE 1-like isoform X2
SwissprotQ9SJW01e-51PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A0A0LF931e-114A0A0A0LF93_CUCSA; Uncharacterized protein
TrEMBLA0A1S3B8411e-115A0A1S3B841_CUCME; protein PHR1-LIKE 1-like isoform X2
STRINGXP_004136602.11e-115(Cucumis sativus)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-34G2-like family protein