PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cucsa.370520.1
Organism
Cucumis sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family NAC
Protein Properties Length: 146aa    MW: 16755.1 Da    PI: 8.5997
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cucsa.370520.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.81.8e-1821294128
             NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                     G+ F Ptd+el+++yL +k+ g  ++   +++ +diy+ eP ++  ++   + ++++ F++ +kk+++  rk    + ++W+   k ++v+s+++
  Cucsa.370520.1   2 GYTFCPTDQELLCYYLYHKIVGGFVPP-IMLPVIDIYTKEPPQIWqQCGGVDGQDVHLFTCLKKKKSRVVRKVG-PNGAIWSGESKATKVFSHNN 94 
                     99*********************9888.789*************734555578899****99998764433333.24677*************** PP

             NAM  98 elvglkktLvfy....kgrapkgektdWvmheyrl 128
                     +lvg  k + f     k++  + ++ +W+m ey+l
  Cucsa.370520.1  95 TLVGAFKRFHFEnpkmKKDGDHNNNYSWIMYEYTL 129
                     ***********9776555666677999******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.9111146IPR003441NAC domain
SuperFamilySSF1019415.62E-212134IPR003441NAC domain
PfamPF023654.3E-132129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MGYTFCPTDQ ELLCYYLYHK IVGGFVPPIM LPVIDIYTKE PPQIWQQCGG VDGQDVHLFT  60
CLKKKKSRVV RKVGPNGAIW SGESKATKVF SHNNTLVGAF KRFHFENPKM KKDGDHNNNY  120
SWIMYEYTLH PNLVPEGVVH DSFVLX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011660358.11e-56PREDICTED: uncharacterized protein LOC105436381
TrEMBLA0A0A0L8074e-90A0A0A0L807_CUCSA; Uncharacterized protein
STRINGXP_004170453.17e-90(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.12e-10NAC domain containing protein 96