PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000391
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family MYB_related
Protein Properties Length: 159aa    MW: 18137.1 Da    PI: 4.0988
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000391genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.2e-094282348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia++++ gRt++++k+rw+++l
      DCAR_000391  4 SWSAIAARLP-GRTDNEIKNRWHSHL 28
                     5*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.808132IPR017930Myb domain
PfamPF002492.0E-7428IPR001005SANT/Myb domain
SuperFamilySSF466892.73E-8435IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-12429IPR009057Homeodomain-like
CDDcd001676.03E-7528No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MLYSWSAIAA RLPGRTDNEI KNRWHSHLKK RIANNVVEVT EPKIEQIDST TDTLMTCEYP  60
NDFVAPELPK LEEIYEDDPI PSYASNNIGA SSISNNNIAP PAYVSSADPH ISFWREPYSL  120
EDVYGIDQCA TYVDPEFGMP RAEDWFGEPF YPYYEVLY*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017228250.11e-111PREDICTED: myb-related protein Myb4-like
TrEMBLA0A175Y9001e-113A0A175Y900_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-13myb domain protein 14