PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_000909
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 157aa    MW: 16805.8 Da    PI: 6.7792
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_000909genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP69.11.5e-211478873
          TCP  8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73
                  +    k+ gR+RR+R+sa+caar+F+L + LG+++ ++ti+WLl+  +++i  + g  ++  +e+
  DCAR_000909 14 RKEKNVKGQGRGRRIRVSAPCAARIFQLKEDLGLKSEGETIQWLLEHGEESITRAKGG-TPEITET 78
                 56677899**********************************************9998.2222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136915.5581468IPR017887Transcription factor TCP subgroup
PfamPF036343.6E-172179IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MASSSSSERQ SAPRKEKNVK GQGRGRRIRV SAPCAARIFQ LKEDLGLKSE GETIQWLLEH  60
GEESITRAKG GTPEITETDK EAELVDDDGG SRTGGQAPVG PRPVFIPGRG YWIVPEEGGG  120
PQQVWPVPMA LTHGICTTMQ GTCAAEFSKH NQSTFS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245424.11e-108PREDICTED: transcription factor TCP20-like
TrEMBLA0A162B0861e-110A0A162B086_DAUCS; Uncharacterized protein
STRINGPOPTR_0001s08590.15e-18(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.11e-17TCP family protein