PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_000916

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

TCP

Protein Properties

Length: 143aa MW: 14951.1 Da PI: 9.9678

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_000916	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	44.8	4.7e-14	3	56	17	66
TCP 17 gRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....s 66 gR++ + +sa+caa + +L++ LGf++ +t++WLl a+ + ++ + DCAR_000916 3 GRGKKIKMSASCAAHISQLTKDLGFKSEDETLQWLLDRAEGRGTATPSAnaagG 56 8**************************************987766666633331 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	9.875	1	48	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	4.6E-10	4	53	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence Send to blast
MQGRGKKIKM SASCAAHISQ LTKDLGFKSE DETLQWLLDR AEGRGTATPS ANAAGGASSE 60 TPKVPEKKKA EPICQDAVPK TSGSAPVGPT PVFIPGKGFW MVPDEGGKPQ QVWPVPLVLT 120 RGIGVRMQGP YAPGSSEQNQ KP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017245446.1	4e-95	PREDICTED: transcription factor TCP9-like
TrEMBL	A0A166FZJ4	3e-98	A0A166FZJ4_DAUCS; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	7e-14	TCP family protein

Link Out ? help Back to Top
Phytozome	DCAR_000916