PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_000934

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

TCP

Protein Properties

Length: 137aa MW: 14223.1 Da PI: 4.7051

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_000934	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	68.8	1.9e-21	1	107	24	105
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.........................kaaksa 94 ++ caar+F+L++eLG+ +d++ti+WLlqqa+ ai+ +tgt++ +a+++ + s + + ++g aa++ DCAR_000934 1 MPTRCAARVFQLTKELGLATDGETIQWLLQQAELAIIRATGTGTVPATATvtA--DGSLRVPETKEGaaedvsktsglapvgpstvsvpgygMAAENG 96 899***************************************99999777433..3333333223323355556666777776666666554333333 PP TCP 95 akskksqksaa 105 +k +++q+s + DCAR_000934 97 MKMNQNQTSVS 107 34444444333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	16.758	1	39	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	3.4E-17	1	92	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence Send to blast
MPTRCAARVF QLTKELGLAT DGETIQWLLQ QAELAIIRAT GTGTVPATAT VTADGSLRVP 60 ETKEGAAEDV SKTSGLAPVG PSTVSVPGYG MAAENGMKMN QNQTSVSCEA RASSAEEEGY 120 DEMVLMGKIR FRKGGI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017245574.1	5e-95	PREDICTED: transcription factor TCP9-like
TrEMBL	A0A166FZY3	7e-94	A0A166FZY3_DAUCS; Uncharacterized protein
STRING	XP_010106814.1	6e-21	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA248	24	201

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	7e-15	TCP family protein

Link Out ? help Back to Top
Phytozome	DCAR_000934