PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_001450

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

bZIP

Protein Properties

Length: 336aa MW: 37267.6 Da PI: 6.6523

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_001450	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.9	1.9e-07	178	238	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++k+e +++k +A rsR RK+++i+eLe+ v+ +++e +L+ e e l ++ l +e+ DCAR_001450 178 AKSKAEAKRAK-QQSAHRSRVRKLQYIAELERHVQLFQTESLKLAGEYEFLDQQNLILGMEN 238 57888999999.789**************************999999999988877776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	3.62E-12	181	231	No hit	No description
SuperFamily	SSF57959	3.24E-6	189	233	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.9E-4	190	234	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence Send to blast
MLHPPISPLL CISPPPSEGK YNVDGQYSHQ RCSSESVAIE EQPSWVADLL DEPEMQPKTH 60 RRSASDSSAL YFDASTGTSD TMPPNMAVFN PWMSPQNVVH RGDPMLASFN ANANGNRGQP 120 SRFSTEALLN HSIFSVGDGM MLQGPGATSG PLADQELSLA AEANGQTESG ESSDQSQAKS 180 KAEAKRAKQQ SAHRSRVRKL QYIAELERHV QLFQTESLKL AGEYEFLDQQ NLILGMENRA 240 LRHRLESLSQ EQLLRNMEHD MLERELIRLQ MLYQVQRQQL QQQSQLYPKH RRSKSRDCGN 300 KSLKNKEAAG SSHVSFGDVE SHLASLSLAP KEASS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017236931.1	0.0	PREDICTED: uncharacterized protein At4g06598-like
Refseq	XP_017237653.1	0.0	PREDICTED: uncharacterized protein At4g06598-like
TrEMBL	A0A166GC28	0.0	A0A166GC28_DAUCS; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11445	20	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	7e-37	bZIP family protein

Link Out ? help Back to Top
Phytozome	DCAR_001450