PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_001561
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 165aa    MW: 18559.1 Da    PI: 5.2526
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_001561genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.71.9e-113071546
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                 ++ +rk++NRe+ArrsR RK++ ++eL    ++L + N +L 
  DCAR_001561 30 RKSKRKMSNRESARRSRVRKQKHLDELMAQLAQLRKANNQLV 71
                 689***********************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-102690IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-1027105No hitNo description
PROSITE profilePS502179.992870IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.64E-103079No hitNo description
PfamPF001702.4E-93071IPR004827Basic-leucine zipper domain
CDDcd147028.64E-143170No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MASSSGITTT SGSLNTDLYQ QHLQQLLDQR KSKRKMSNRE SARRSRVRKQ KHLDELMAQL  60
AQLRKANNQL VMIMNVTAQG LLNVEAENSV LRAQVAELEA RLESLNEIIG FLDIENEGFG  120
INEEFCYNAV NDSADMFMLN VNSSMSYMYA NQLPIMASAD MLQY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14248RRSRVRK
24249RRSRVRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017217595.11e-117PREDICTED: ocs element-binding factor 1-like
TrEMBLA0A166GFP71e-115A0A166GFP7_DAUCS; Uncharacterized protein
STRINGXP_009802821.16e-47(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.16e-35basic leucine-zipper 44