PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_001619

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

G2-like

Protein Properties

Length: 203aa MW: 22404.2 Da PI: 4.5417

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_001619	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	48.4	2e-15	80	111	25	56
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56 + AtPk+i+el++v++Lt+++vkSHLQkYRl+ DCAR_001619 80 QLATPKQIRELIQVDDLTNDEVKSHLQKYRLH 111 569***************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.4E-6	80	114	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.8E-13	80	111	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	2.8E-13	80	114	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence Send to blast
MIFNSQQLSL KTRPIFNAPN TITDLLGDVC NISDQIDKLN DIIQRLQDEI IKIDAFKTEL 60 PLTVLFVNDA IVALKEEIMQ LATPKQIREL IQVDDLTNDE VKSHLQKYRL HTRKVPSGTT 120 PTPANGPAAS ALGRLWSCKD QYSESAKQSM SQSGSPQGPL QLTETTGGTS TVKTDSMDDD 180 EDDKSQSYCC KTWIQTSINS DV*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017248592.1	2e-74	PREDICTED: probable transcription factor KAN3
Swissprot	Q9FX84	2e-18	HHO6_ARATH; Transcription factor HHO6
TrEMBL	A0A162B1Z0	1e-146	A0A162B1Z0_DAUCS; Uncharacterized protein
STRING	XP_010255132.1	3e-37	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	5e-17	G2-like family protein

Link Out ? help Back to Top
Phytozome	DCAR_001619

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]