PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_003079
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 135aa    MW: 15234.4 Da    PI: 10.5604
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_003079genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.31.6e-1270118153
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                  ++y+G r +k +g W AeIr p     + +r +lg++ taeeA + + + +k++
  DCAR_003079  70 PKYPGARLRK-WGNWCAEIRNPI----TkRRQWLGTYPTAEEASRVYLEKKKEF 118
                  799999*999.**********72....36*******************999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-670117IPR001471AP2/ERF domain
CDDcd000185.22E-1670111No hitNo description
SuperFamilySSF541718.5E-1371118IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-1571112IPR001471AP2/ERF domain
PROSITE profilePS5103214.98771111IPR001471AP2/ERF domain
SMARTSM003802.2E-671128IPR001471AP2/ERF domain
PRINTSPR003672.2E-67283IPR001471AP2/ERF domain
PRINTSPR003672.2E-694110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MEAAPATATK VSRKKAQPTK EGMKRPKPTK VSVVRIKYTD PDATDDSSSD ETTSSPKQVV  60
HEVHLRKTSP KYPGARLRKW GNWCAEIRNP ITKRRQWLGT YPTAEEASRV YLEKKKEFGE  120
FVKNSKDQIK TSPC*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017225670.16e-95PREDICTED: ethylene-responsive transcription factor ERF117-like
SwissprotQ9M9B26e-16EF117_ARATH; Ethylene-responsive transcription factor ERF117
TrEMBLA0A162B5W81e-93A0A162B5W8_DAUCS; Uncharacterized protein
STRINGBra024743.1-P9e-19(Brassica rapa)
STRINGMigut.E00336.1.p3e-19(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.15e-18ERF family protein