PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_007080
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 299aa    MW: 33472.8 Da    PI: 5.9238
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_007080genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.000111782111654
                  HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  iN+ +  ++el+P +     +K + a++L +AveY+ ++
  DCAR_007080 178 INDQLMAIQELIPGS-----QKKDMATTLAEAVEYLIYM 211
                  9************98.....8999***********9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.31E-4161216No hitNo description
SuperFamilySSF474594.71E-9161231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.264162211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-9170235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MIPPTGEENL QTPVEDIRKW IDNTQEEFHF EDLNFPTPEK PQEFKTNASQ FPQEEIGHDT  60
TSKSPRAQSG TPDAPKVDML SPELKSPILM QSENEASKGE AAAKIVQGRG MPADNDITII  120
NPTVTGETTR NRKRKEIVVD VNDNYEKNAR FPRRVASSSA SQRVAHHTHP GKKSKLSIND  180
QLMAIQELIP GSQKKDMATT LAEAVEYLIY MKIQEQMLQQ EVQQLRQAMV MMYQSIQNFM  240
QNPLGTPLNM GGHAQLGGMG FRPTVQPSMN SFVHPQAPGP SQQQRIDWDQ IGDTQRII*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A162AUW90.0A0A162AUW9_DAUCS; Uncharacterized protein