PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008014
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 222aa    MW: 24021.1 Da    PI: 10.0252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008014genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.5e-163787256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 +y GVr++  +g++vAeI++p +   +++++lg+f tae+Aa a+++a+++l+g+
  DCAR_008014 37 RYIGVRRRL-SGKYVAEIKHPLK---NANVWLGTFETAEQAAMAYDEAARELRGN 87
                 699***888.8*********865...4**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.04E-233794No hitNo description
Gene3DG3DSA:3.30.730.105.4E-273794IPR001471AP2/ERF domain
SMARTSM003808.8E-2837100IPR001471AP2/ERF domain
PfamPF008476.3E-113786IPR001471AP2/ERF domain
PROSITE profilePS5103219.523794IPR001471AP2/ERF domain
SuperFamilySSF541715.95E-193795IPR016177DNA-binding domain
PRINTSPR003672.3E-63849IPR001471AP2/ERF domain
PRINTSPR003672.3E-66076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MASKEKVAES SKAVEAGASA VVSAKAVEAG GSREEVRYIG VRRRLSGKYV AEIKHPLKNA  60
NVWLGTFETA EQAAMAYDEA ARELRGNKTR TNFPLPDAFY QRRNVGQTKL SKILIPKSTG  120
KSADQERFSA AVRPTLATVT GGAGSWIGYG SSYGLSPMYP YHRLPYVPMQ WGFPPMLNRS  180
PEFRTNLLPA QSDSDSSSVI AGNPTRKGLD IDLNLPPPSE D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-163895361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-163895664ATERF1
3gcc_A4e-163895664ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233704.11e-162PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLA0A166EZW11e-161A0A166EZW1_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-15erf domain protein 9