PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008015
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 204aa    MW: 21896.4 Da    PI: 8.8757
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008015genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.8e-163685255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr ++  gr+ AeIrdp +   +  ++lg+f+tae Aa+a ++a++k++g
  DCAR_008015 36 RYRGVRKRP-GGRYGAEIRDPET---KNCIWLGTFDTAELAARAFDEAARKYRG 85
                 69*******.9*********744...389***********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.0E-83685IPR001471AP2/ERF domain
PROSITE profilePS5103220.9033693IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-273693IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-183694IPR016177DNA-binding domain
CDDcd000181.16E-253693No hitNo description
SMARTSM003803.4E-293699IPR001471AP2/ERF domain
PRINTSPR003671.2E-73748IPR001471AP2/ERF domain
PRINTSPR003671.2E-75975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MASKEKAAAE SSKAVEASVN AEESSKTLEP KGEEVRYRGV RKRPGGRYGA EIRDPETKNC  60
IWLGTFDTAE LAARAFDEAA RKYRGDTAKT NFPTPDANHK RRNDGEMMGQ ERFAAALNPN  120
LAALNGGAGS SLGYRSGGGF PLTYPYYGKP YVPMQGYRLP SNPEFQANII ASGSHLASPS  180
SVIDVNPTRK GLDLDLNLPP PSD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1633931172Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233705.11e-148PREDICTED: ethylene-responsive transcription factor 8-like
TrEMBLA0A166EZX21e-146A0A166EZX2_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.12e-18ethylene responsive element binding factor 4