PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008117
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 621aa    MW: 68896.8 Da    PI: 7.8152
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008117genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-10465511554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +  rE+ RRdr+N++f+eL ++l +    +  K +Ka iL   ++ +++L
  DCAR_008117 465 KACREKMRRDRLNDKFQELSSILEPG---RTSKTDKAIILSDCIRMVNQL 511
                  678**********************8...8***********999999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575117No hitNo description
PROSITE profilePS5147318.89724128IPR002902Gnk2-homologous domain
PfamPF016572.9E-2030125IPR002902Gnk2-homologous domain
PROSITE profilePS5147319.748133235IPR002902Gnk2-homologous domain
PfamPF016575.6E-15146231IPR002902Gnk2-homologous domain
Gene3DG3DSA:2.60.120.2001.0E-10246334IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF561124.91E-27304418IPR011009Protein kinase-like domain
PROSITE profilePS5001112.019327620IPR000719Protein kinase domain
PfamPF077141.0E-15330413IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
PROSITE patternPS001070333355IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:3.30.200.203.2E-25335404No hitNo description
PROSITE profilePS5088812.379460511IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.19E-8464516No hitNo description
PfamPF000103.8E-8464511IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-12466535IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.0E-9466517IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-11467533IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    Send to blast
MAFHIKSLIF FSVLIGCICV SQSDYLFNVC GSNGNYTNNS VYKTNLDKAF DNLLFAANTS  60
NSGFYNASFG EESNRVYTLV LCRGDVQPDI CRSCVKDSIN MLKEQCPHQK EADEWYQECL  120
LRYSNTSILN TLVTEPTRMH SGTVASDKAQ FNQDLRDMLD NLKAQAIQQK FATAKQTTQD  180
RTIYGLMQCT PDLSSTQCSN CLDKAIENIP TCCSGRTGGQ VLKPSCRLRF EIGPFYDGTP  240
SVDIQTPSAK QPPAVAGTDN NKKQTIIIIV VVIVGTVTLL LVLFCIYKRK GKPRTAAGIL  300
PKDMVNLQTI QSIQYNFGTL EVATNCFSGG NKLGQGGFGA VYKGTLQNGE RIAVKRLSAG  360
SNQGQQEFIN EVVIVAELQH KNLVRLHGYC YEGTERLLVY ELLPNASLDH FILGMYLEFW  420
MVFSVVTEFG DSLGSSDAFK EHGFIHIHHP TYLTKSGSCS LSGSKACREK MRRDRLNDKF  480
QELSSILEPG RTSKTDKAII LSDCIRMVNQ LREEARKLKD SHDILQDKMN ELKAEKNELR  540
DEKQKLKAEK EVLEQQVKGL HTQPGFLPPA VVSSPFAGAG QFFGGKMVPF MGYPGVPMWQ  600
FTPPAAVDTT HDHVLHSPVA *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6cth_A2e-223144464139Concanavalin A-like lectin protein kinase family protein
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017234643.10.0PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X1
TrEMBLA0A166F3120.0A0A166F312_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-68bHLH family protein